Research Output

2019

Hyaluronic acid-based hydrogels with independently tunable mechanical and bioactive signaling features

Godesky, M. D. & Shreiber, D. I., Nov 1 2019, In : Biointerphases. 14, 6, 061005.

Research output: Contribution to journalArticle

4 Scopus citations

Identification and characterization of synthetic chondroitin-4-sulfate binding peptides in neuronal functions

Loers, G., Liao, Y., Hu, C., Xue, W., Shen, H., Zhao, W. & Schachner, M., Dec 1 2019, In : Scientific reports. 9, 1, 1064.

Research output: Contribution to journalArticle

5 Scopus citations

Identifying Crohn's disease signal from variome analysis

Wang, Y., Miller, M., Astrakhan, Y., Petersen, B. S., Schreiber, S., Franke, A. & Bromberg, Y., Sep 30 2019, In : Genome Medicine. 11, 1, 59.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Identifying Dynamics of Brain Function Via Boolean Matrix Factorization

Haddad, A., Shamsi, F., Zhu, L. & Najafizadeh, L., Feb 19 2019, Conference Record of the 52nd Asilomar Conference on Signals, Systems and Computers, ACSSC 2018. Matthews, M. B. (ed.). IEEE Computer Society, p. 661-665 5 p. 8645099. (Conference Record - Asilomar Conference on Signals, Systems and Computers; vol. 2018-October).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Identifying mutation-driven changes in gene functionality that lead to venous thromboembolism

Wang, Y. & Bromberg, Y., Sep 1 2019, In : Human mutation. 40, 9, p. 1321-1329 9 p.

Research output: Contribution to journalArticle

3 Scopus citations

Impact of Protein Corona in Nanoflare-Based Biomolecular Detection and Quantification

Wang, H., Dardir, K., Lee, K. B. & Fabris, L., Oct 16 2019, In : Bioconjugate Chemistry. 30, 10, p. 2555-2562 8 p.

Research output: Contribution to journalArticle

2 Scopus citations

Improvement in women's cardiovascular functioning during cognitive-behavioral therapy for alcohol use disorder

Buckman, J. F., Vaschillo, B., Vaschillo, E. G., Epstein, E. E., Nguyen-Louie, T. T., Lesnewich, L. M., Eddie, D. & Bates, M. E., Dec 2019, In : Psychology of Addictive Behaviors. 33, 8, p. 659-668 10 p.

Research output: Contribution to journalArticle

Improving nuclei/gland instance segmentation in histopathology images by full resolution neural network and spatial constrained loss

Qu, H., Yan, Z., Riedlinger, G. M., De, S. & Metaxas, D. N., 2019, Medical Image Computing and Computer Assisted Intervention – MICCAI 2019 - 22nd International Conference, Proceedings. Shen, D., Yap, P-T., Liu, T., Peters, T. M., Khan, A., Staib, L. H., Essert, C. & Zhou, S. (eds.). Springer, p. 378-386 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11764 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Increased Dynamics of α-Synuclein Fibrils by β-Synuclein Leads to Reduced Seeding and Cytotoxicity

Yang, X., Williams, J. K., Yan, R., Mouradian, M. M. & Baum, J., Dec 1 2019, In : Scientific reports. 9, 1, 17579.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Increased Number and Activity of a Lateral Subpopulation of Hypothalamic Orexin/Hypocretin Neurons Underlies the Expression of an Addicted State in Rats

James, M. H., Stopper, C. M., Zimmer, B. A., Koll, N. E., Bowrey, H. E. & Aston-Jones, G., Jun 1 2019, In : Biological Psychiatry. 85, 11, p. 925-935 11 p.

Research output: Contribution to journalArticle

24 Scopus citations

Inhibited personality temperaments translated through enhanced avoidance and associative learning increase vulnerability for PTSD

Allen, M. T., Myers, C. E., Beck, K. D., Kevin, K. C. & Servatius, R. J., Jan 1 2019, In : Frontiers in Psychology. 10, MAR, 496.

Research output: Contribution to journalReview article

Open Access
2 Scopus citations

Inhibition of EphA/Ephrin-A signaling using genetic and pharmacologic approaches improves recovery following traumatic brain injury in mice

Teng, S., Palmieri, A., Maita, I., Zheng, C., Das, G., Park, J., Zhou, R., Suss, J. A. & Varia, S., Aug 24 2019, In : Brain injury. 33, 10, p. 1385-1401 17 p.

Research output: Contribution to journalArticle

1 Scopus citations
4 Scopus citations

Inhibition of p70 ribosomal S6 kinase 1 (S6K1)by PF-4708671 decreased infarct size in early cerebral ischemia-reperfusion with decreased BBB permeability

Chi, O. Z., Kiss, G. K., Mellender, S. J., Liu, X., Liu, S., Jacinto, E. & Weiss, H. R., Jul 15 2019, In : European Journal of Pharmacology. 855, p. 202-207 6 p.

Research output: Contribution to journalArticle

2 Scopus citations

Insight into the mechanism of action of dimethyl fumarate in multiple sclerosis

Yadav, S. K., Soin, D., Ito, K. & Dhib-Jalbut, S., Apr 12 2019, In : Journal of Molecular Medicine. 97, 4, p. 463-472 10 p.

Research output: Contribution to journalReview article

7 Scopus citations

Insights into genetics, human biology and disease gleaned from family based genomic studies

Centers for Mendelian Genomics, Apr 1 2019, In : Genetics in Medicine. 21, 4, p. 798-812 15 p.

Research output: Contribution to journalReview article

20 Scopus citations

Instance segmentation of neural cells

Yi, J., Wu, P., Jiang, M., Hoeppner, D. J. & Metaxas, D. N., Jan 1 2019, Computer Vision – ECCV 2018 Workshops, Proceedings. Leal-Taixé, L. & Roth, S. (eds.). Springer Verlag, p. 395-402 8 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11134 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Insulin-like Growth Factor II: An Essential Adult Stem Cell Niche Constituent in Brain and Intestine

Ziegler, A. N., Feng, Q., Chidambaram, S., Testai, J. M., Kumari, E., Rothbard, D. E., Constancia, M., Sandovici, I., Cominski, T., Pang, K., Gao, N., Wood, T. L. & Levison, S. W., Apr 9 2019, In : Stem Cell Reports. 12, 4, p. 816-830 15 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations
2 Scopus citations

Intelligence mindset shapes neural learning signals and memory

Bejjani, C., DePasque, S. & Tricomi, E., Sep 2019, In : Biological Psychology. 146, 107715.

Research output: Contribution to journalArticle

Intercellular calcium waves integrate hormonal control of glucose output in the intact liver

Gaspers, L. D., Pierobon, N. & Thomas, A. P., Jun 1 2019, In : Journal of Physiology. 597, 11, p. 2867-2885 19 p.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

Interferon Lambda: Toward a Dual Role in Cancer

Lasfar, A., Zloza, A., Silk, A. W., Lee, L. Y. & Cohen-Solal, K. A., Jan 2019, In : Journal of Interferon and Cytokine Research. 39, 1, p. 22-29 8 p.

Research output: Contribution to journalArticle

6 Scopus citations

Interrogating the genetic determinants of Tourette's syndrome and other tiC disorders through genome-wide association studies

Tourette Association of America International Consortium for Genetics, Gilles de la Tourette GWAS Replication Initiative, Tourette International Collaborative Genetics Study & Psychiatric Genomics Consortium Tourette Syndrome Working Group, Mar 1 2019, In : American Journal of Psychiatry. 176, 3, p. 217-227 11 p.

Research output: Contribution to journalArticle

12 Scopus citations

Intragenic antagonistic roles of protein and circRNA in tumorigenesis

Guarnerio, J., Zhang, Y., Cheloni, G., Panella, R., Mae Katon, J., Simpson, M., Matsumoto, A., Papa, A., Loretelli, C., Petri, A., Kauppinen, S., Garbutt, C., Petur Nielsen, G., Deshpande, V., Castillo-Martin, M., Cordon-Cardo, C., Dimitrios, S., Clohessy, J. G., Batish, M. & Pandolfi, P. P., Aug 1 2019, In : Cell Research. 29, 8, p. 628-640 13 p.

Research output: Contribution to journalArticle

12 Scopus citations

Introducing astrocytes on a neuromorphic processor: Synchronization, local plasticity and edge of chaos

Tang, G., Polykretis, I. E., Ivanov, V. A., Shah, A. & Michmizos, K. P., Mar 26 2019, Proceedings of the 2019 7th Annual Neuro-Inspired Computational Elements Workshop, NICE 2019. Association for Computing Machinery, a12. (ACM International Conference Proceeding Series).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Ionic current correlations are ubiquitous across phyla

Tran, T., Unal, C. T., Severin, D., Zaborszky, L., Rotstein, H. G., Kirkwood, A. & Golowasch, J., Dec 1 2019, In : Scientific reports. 9, 1, 1687.

Research output: Contribution to journalArticle

Open Access
4 Scopus citations

ISMB/ECCB 2019 Proceedings

Bromberg, Y., El-Mabrouk, N. & Radivojac, P., Jul 15 2019, In : Bioinformatics. 35, 14, p. i1-i2 btz439.

Research output: Contribution to journalEditorial

Open Access

Joint segmentation and fine-grained classification of nuclei in histopathology images

Qu, H., Riedlinger, G., Wu, P., Huang, Q., Yi, J., De, S. & Metaxas, D., Apr 2019, ISBI 2019 - 2019 IEEE International Symposium on Biomedical Imaging. IEEE Computer Society, p. 900-904 5 p. 8759457. (Proceedings - International Symposium on Biomedical Imaging; vol. 2019-April).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

3 Scopus citations

Kinesins: Motor Proteins as Novel Target for the Treatment of Chronic Pain

Shantanu, P. A., Sharma, D., Sharma, M., Vaidya, S., Sharma, K., Kalia, K., Tao, Y. X., Shard, A. & Tiwari, V., Jun 1 2019, In : Molecular Neurobiology. 56, 6, p. 3854-3864 11 p.

Research output: Contribution to journalReview article

1 Scopus citations

Knockdown of chondroitin-4-sulfotransferase-1, but not of dermatan-4-sulfotransferase-1, accelerates regeneration of zebrafish after spinal cord injury

Sahu, S., Li, R., Loers, G. & Schachner, M., Jan 1 2019, In : FASEB Journal. 33, 2, p. 2252-2262 11 p.

Research output: Contribution to journalArticle

4 Scopus citations

Learning functions in short-term cocaine users

Kumar, D. S., Benedict, E., Wu, O., Rubin, E., Gluck, M. A., Foltin, R. W., Myers, C. E. & Vadhan, N. P., Jun 2019, In : Addictive Behaviors Reports. 9, 100169.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Learning science communication skills using improvisation, video recordings, and practice, practice, practice

Ponzio, N. M., Alder, J., Nucci, M., Dannenfelser, D., Hilton, H., Linardopoulos, N. & Lutz, C., Jan 1 2019, In : Journal of Microbiology and Biology Education. 19, 1, 1433.

Research output: Contribution to journalArticle

Open Access

Let's adopt ICOP: Speaking the same language

Benoliel, R., Jan 1 2019, In : Journal of Oral and Facial Pain and Headache. 33, 3, p. 245-246 2 p.

Research output: Contribution to journalEditorial

Letter from the Editor-in-Chief: Growth of the Journal

Mouradian, M. M., Oct 1 2019, In : Neurotherapeutics. 16, 4, 1 p.

Research output: Contribution to journalEditorial

Open Access

Linguistically-driven framework for computationally efficient and scalable sign recognition

Metaxas, D., Dilsizian, M. & Neidle, C., Jan 1 2019, LREC 2018 - 11th International Conference on Language Resources and Evaluation. Isahara, H., Maegaard, B., Piperidis, S., Cieri, C., Declerck, T., Hasida, K., Mazo, H., Choukri, K., Goggi, S., Mariani, J., Moreno, A., Calzolari, N., Odijk, J. & Tokunaga, T. (eds.). European Language Resources Association (ELRA), p. 1711-1718 8 p. (LREC 2018 - 11th International Conference on Language Resources and Evaluation).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Localization of Hippo Signaling Components in Drosophila by Fluorescence and Immunofluorescence

Rauskolb, C. & Irvine, K., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 61-73 13 p. (Methods in Molecular Biology; vol. 1893).

Research output: Chapter in Book/Report/Conference proceedingChapter

2 Scopus citations

Long noncoding RNA (lncRNA): a target in neuropathic pain

Wu, S., Bono, J. & Tao, Y. X., Jan 2 2019, In : Expert Opinion on Therapeutic Targets. 23, 1, p. 15-20 6 p.

Research output: Contribution to journalArticle

12 Scopus citations
22 Scopus citations

Loss of Par1b/MARK2 primes microglia during brain development and enhances their sensitivity to injury 11 Medical and Health Sciences 1109 Neurosciences

Dibona, V. L., Zhu, W., Shah, M. K., Rafalia, A., Ben Cheikh, H., Crockett, D. P. & Zhang, H., Jan 17 2019, In : Journal of Neuroinflammation. 16, 1, 11.

Research output: Contribution to journalArticle

3 Scopus citations

Loss of striatal tyrosine-hydroxylase interneurons impairs instrumental goal-directed behavior

Kaminer, J., Espinoza, D., Bhimani, S., Tepper, J. M., Koos, T. & Shiflett, M. W., Aug 1 2019, In : European Journal of Neuroscience. 50, 4, p. 2653-2662 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Lower resting cardiac autonomic balance in young adults with current major depression

Brush, C. J., Olson, R. L., Ehmann, P. J., Bocchine, A. J., Bates, M. E., Buckman, J. F., Leyro, T. M. & Alderman, B. L., Aug 2019, In : Psychophysiology. 56, 8, e13385.

Research output: Contribution to journalArticle

2 Scopus citations

Lumbar spinal stenosis

Heary, R., Anderson, P. A. & Arnold, P. M., Jan 1 2019, In : Neurosurgical focus. 46, 5, E1.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Mapping the human brain's cortical-subcortical functional network organization

Ji, J. L., Spronk, M., Kulkarni, K., Repovš, G., Anticevic, A. & Cole, M. W., Jan 15 2019, In : NeuroImage. 185, p. 35-57 23 p.

Research output: Contribution to journalArticle

18 Scopus citations

Maternal immune activation with staphylococcal enterotoxin A produces unique behavioral changes in C57BL/6 mouse offspring

Glass, R., Norton, S., Fox, N. & Kusnecov, A. W., Jan 2019, In : Brain, Behavior, and Immunity. 75, p. 12-25 14 p.

Research output: Contribution to journalArticle

8 Scopus citations
1 Scopus citations

Mechanical In-exsufflation-Expiratory Flows as Indication for Tracheostomy Tube Decannulation

Bach, J. R., Giménez, G. C. & Chiou, M., Mar 1 2019, In : American Journal of Physical Medicine and Rehabilitation. 98, 3, p. E18-E20

Research output: Contribution to journalArticle

3 Scopus citations

Mechanism of the JAK2/STAT3-CAV-1-NR2B signaling pathway in painful diabetic neuropathy

Li, C. D., Zhao, J. Y., Chen, J. L., Lu, J. H., Zhang, M. B., Huang, Q., Cao, Y. N., Jia, G. L., Tao, Y. X., Li, J. & Cao, H., Apr 1 2019, In : Endocrine. 64, 1, p. 55-66 12 p.

Research output: Contribution to journalArticle

Open Access
3 Scopus citations

Medical intensive care unit admission among patients with and without HIV, hepatitis c virus, and alcohol-related diagnoses in the United States: A national, retrospective cohort study, 1997-2014

Rentsch, C. T., Tate, J. P., Steel, T., Butt, A. A., Gibert, C. L., Huang, L., Pisani, M., Soo Hoo, G. W., Crystal, S., Rodriguez-Barradas, M. C., Brown, S. T., Freiberg, M. S., Graber, C. J., Kim, J. W., Rimland, D., Justice, A. C., Fiellin, D. A., Crothers, K. A. & Akgün, K. M., Feb 1 2019, In : Journal of Acquired Immune Deficiency Syndromes. 80, 2, p. 145-151 7 p.

Research output: Contribution to journalArticle

1 Scopus citations