Research Output 1965 2020

Filter
Review article
2020

Autophagy modulator scoring system: a user-friendly tool for quantitative analysis of methodological integrity of chemical autophagy modulator studies

Dong, Y., Hu, Y., Sarkar, S., Zong, W. X., Li, M., Feng, D., Song, J. X., Li, M., Medina, D. L., Tan, J., Zhang, Z., Yue, Z. & Lu, J. H., Feb 1 2020, In : Autophagy. 16, 2, p. 195-202 8 p.

Research output: Contribution to journalReview article

Autophagy
Phosphatidylinositol 3-Kinase
Pharmacology

Unknown to Known: Advancing Knowledge of Coral Gene Function

Cleves, P. A., Shumaker, A., Lee, J. M., Putnam, H. M. & Bhattacharya, D., Feb 2020, In : Trends in Genetics. 36, 2, p. 93-104 12 p.

Research output: Contribution to journalReview article

Anthozoa
Genes
Clustered Regularly Interspaced Short Palindromic Repeats
Coral Reefs
Molecular Sequence Annotation
2019

Age modulates liver responses to asparaginase-induced amino acid stress in mice

Nikonorova, I. A., Zhu, Q., Signore, C. C., Mirek, E. T., Jonsson, W. O., Kong, B., Guo, G. L., Belden, W. J. & Anthony, T. X. G., Jan 1 2019, In : Journal of Biological Chemistry. 294, 38, p. 12864-13875 1012 p.

Research output: Contribution to journalReview article

Open Access
Asparaginase
Liver
Amino Acids
Genes
Transcriptome

At the Interface of Lifestyle, Behavior, and Circadian Rhythms: Metabolic Implications

Bae, S. A., Fang, M. Z., Rustgi, V., Zarbl, H. & Androulakis, I. P., Aug 28 2019, In : Frontiers in Nutrition. 6, 132.

Research output: Contribution to journalReview article

Open Access
Circadian Rhythm
circadian rhythm
lifestyle
Life Style
Circadian Clocks
tea (beverage)
Microbiota
Polyphenols
Tea
gastrointestinal system
1 Citation (Scopus)

Effects and mechanisms of tea regulating blood pressure: Evidences and promises

Li, D., Wang, R., Huang, J., Cai, Q., Yang, C. S., Wan, X. & Xie, Z., May 2019, In : Nutrients. 11, 5, 1115.

Research output: Contribution to journalReview article

Open Access
Tea
tea
blood pressure
hypertension
Blood Pressure
1 Citation (Scopus)

Flavonoids Alleviating Insulin Resistance through Inhibition of Inflammatory Signaling

Ren, N., Kim, E., Li, B., Pan, H., Tong, T., Yang, C. & Tu, Y., May 15 2019, In : Journal of agricultural and food chemistry. 67, 19, p. 5361-5373 13 p.

Research output: Contribution to journalReview article

Flavonoids
insulin resistance
Insulin Resistance
flavonoids
Insulin
1 Citation (Scopus)

Genome Evolution of Coral Reef Symbionts as Intracellular Residents

González-Pech, R. A., Bhattacharya, D., Ragan, M. A. & Chan, C. X., Sep 2019, In : Trends in Ecology and Evolution. 34, 9, p. 799-806 8 p.

Research output: Contribution to journalReview article

symbiont
symbiosis
symbionts
coral reefs
coral reef
8 Citations (Scopus)

Growth hormone therapy in children; research and practice – A review

Collett-Solberg, P. F., Jorge, A. A. L., Boguszewski, M. C. S., Miller, B. S., Choong, C. S. Y., Cohen, P., Hoffman, A. R., Luo, X., Radovick, S. & Saenger, P., Feb 1 2019, In : Growth Hormone and IGF Research. 44, p. 20-32 13 p.

Research output: Contribution to journalReview article

Growth Hormone
Research
Human Growth Hormone
Growth
Molecular Biology
2 Citations (Scopus)

Role of Macrophages in Acute Lung Injury and Chronic Fibrosis Induced by Pulmonary Toxicants

Laskin, D. L., Malaviya, R. & Laskin, J. D., Apr 1 2019, In : Toxicological Sciences. 168, 2, p. 287-301 15 p.

Research output: Contribution to journalReview article

Pulmonary Fibrosis
Acute Lung Injury
Macrophages
Pulmonary diseases
Wounds and Injuries
7 Citations (Scopus)

Role of tumor and host autophagy in cancer metabolism

Poillet-Perez, L. & White, E., Jun 1 2019, In : Genes and Development. 33, 11-12, p. 610-619 10 p.

Research output: Contribution to journalReview article

Open Access
Autophagy
Neoplasms
Growth
Starvation
Up-Regulation
1 Citation (Scopus)

Roles of OGG1 in transcriptional regulation and maintenance of metabolic homeostasis

Sampath, H. & Lloyd, R. S., Sep 1 2019, In : DNA Repair. 81, 102667.

Research output: Contribution to journalReview article

Oxidative stress
Oxidative Stress
Homeostasis
Maintenance
DNA Damage

Scientists on the Spot: Autophagy and heart disease

Voigt, N. & Sadoshima, J., Jan 1 2019, In : Cardiovascular research. 115, 10, p. E91-E92

Research output: Contribution to journalReview article

Open Access
Autophagy
Heart Diseases
6 Citations (Scopus)

The pleiotropic effects of glutamine metabolism in cancer

Bott, A. J., Maimouni, S. & Zong, W. X., Jun 2019, In : Cancers. 11, 6, 770.

Research output: Contribution to journalReview article

Open Access
Glutamine
Neoplasms
Nitrogen
Cellular Microenvironment
Amino Acids

The young and the restless: Isolating the dynamic mammalian preribosomes

Jacinto, E., Jan 1 2019, In : Journal of Biological Chemistry. 294, 28, p. 10758-10759 2 p.

Research output: Contribution to journalReview article

Open Access
Ribosomes
Purification
Ribonucleoproteins
Structural analysis
Yeast
3 Citations (Scopus)

Understanding Environmental Contaminants' Direct Effects on Non-alcoholic Fatty Liver Disease Progression

Armstrong, L. E. & Guo, G., Sep 1 2019, In : Current environmental health reports. 6, 3, p. 95-104 10 p.

Research output: Contribution to journalReview article

Disease Progression
Polychlorinated Biphenyls
Fatty Liver
Non-alcoholic Fatty Liver Disease
Liver
2018
12 Citations (Scopus)

Biomanufacturing for clinically advanced cell therapies

Aijaz, A., Li, M., Smith, D., Khong, D., Leblon, C., Fenton, O. S., Olabisi, R. M., Libutti, S., Tischfield, J., Maus, M. V., Deans, R., Barcia, R. N., Anderson, D. G., Ritz, J., Preti, R. & Parekkadan, B., Jun 1 2018, In : Nature biomedical engineering. 2, 6, p. 362-376 15 p.

Research output: Contribution to journalReview article

Transplants
T-cells
Antigens
Cell- and Tissue-Based Therapy
T-Cell Antigen Receptor
47 Citations (Scopus)

Mechanisms of physiological and pathological cardiac hypertrophy

Nakamura, M. & Sadoshima, J., Jul 1 2018, In : Nature Reviews Cardiology. 15, 7, p. 387-407 21 p.

Research output: Contribution to journalReview article

Cardiomegaly
Hypertrophy
Cardiac Myocytes
Untranslated RNA
Workload
11 Citations (Scopus)

Modulation of inflammation as a way of delaying alzheimer’s disease progression: The diet’s role

Businaro, R., Corsi, M., Asprino, R., Di Lorenzo, C., Laskin, D., Corbo, R. M., Ricci, S. & Pinto, A., Jan 1 2018, In : Current Alzheimer Research. 15, 4, p. 363-380 18 p.

Research output: Contribution to journalReview article

Microglia
Disease Progression
Alzheimer Disease
Diet
Inflammation
48 Citations (Scopus)

New insights into the role of mtor signaling in the cardiovascular system

Sciarretta, S., Forte, M., Frati, G. & Sadoshima, J., Feb 2 2018, In : Circulation research. 122, 3, p. 489-505 17 p.

Research output: Contribution to journalReview article

Sirolimus
Cardiovascular System
Heart Failure
Pharmacology
Physiological Phenomena
24 Citations (Scopus)

Studies on prevention of obesity, metabolic syndrome, diabetes, cardiovascular diseases and cancer by tea

Yang, C. S., Wang, H. & Sheridan, Z. P., Jan 2018, In : Journal of Food and Drug Analysis. 26, 1, p. 1-13 13 p.

Research output: Contribution to journalReview article

metabolic syndrome
Tea
tea
cardiovascular diseases
diabetes
29 Citations (Scopus)

The hippo signaling network and its biological functions

Misra, J. R. & Irvine, K. D., Nov 23 2018, In : Annual Review of Genetics. 52, p. 65-87 23 p.

Research output: Contribution to journalReview article

Cues
Long-Acting Thyroid Stimulator
Cell Proliferation
Cell Polarity
Intercellular Junctions
42 Citations (Scopus)

The Role of Autophagy in the Heart

Sciarretta, S., Maejima, Y., Zablocki, D. & Sadoshima, J., Feb 10 2018, In : Annual Review of Physiology. 80, p. 1-26 26 p.

Research output: Contribution to journalReview article

Autophagy
Homeostasis
Mitochondrial Degradation
Mitochondrial Proteins
Reperfusion Injury

The structure and biological function of CREG

Ghobrial, G., Araujo, L., Jinwala, F., Li, S. & Lee, L. Y., Oct 26 2018, In : Frontiers in Cell and Developmental Biology. 6, OCT, 136.

Research output: Contribution to journalReview article

Genes
Developmental Genes
Somatomedin Receptors
Flavin Mononucleotide
Cysteine Proteases
1 Citation (Scopus)

Transcription factors as critical players in melanoma invasiveness, drug resistance, and opportunities for therapeutic drug development

Cohen-Solal, K. A., Kaufman, H. L. & Lasfar, A., Mar 2018, In : Pigment Cell and Melanoma Research. 31, 2, p. 241-252 12 p.

Research output: Contribution to journalReview article

Drug Resistance
Melanoma
Transcription Factors
Tumors
Tumor Microenvironment
27 Citations (Scopus)

Use of curcumin in diagnosis, prevention, and treatment of Alzheimer's disease

Chen, M., Du, Z. Y., Zheng, X., Li, D. L., Zhou, R. P. & Zhang, K., Apr 2018, In : Neural Regeneration Research. 13, 4, p. 742-752 11 p.

Research output: Contribution to journalReview article

Curcumin
Alzheimer Disease
Amyloid
Chronic Disease
Cerebrovascular Disorders
2017
3 Citations (Scopus)

Antifungal activity of plasmacytoid dendritic cells and the impact of chronic HIV infection

Maldonado, S. & Fitzgerald-Bocarsly, P., Dec 4 2017, In : Frontiers in immunology. 8, DEC, 1705.

Research output: Contribution to journalReview article

Dendritic Cells
HIV Infections
Opportunistic Infections
HIV
Immunity
32 Citations (Scopus)

Anti-TNFα therapy in inflammatory lung diseases

Malaviya, R., Laskin, J. D. & Laskin, D. L., Dec 2017, In : Pharmacology and Therapeutics. 180, p. 90-98 9 p.

Research output: Contribution to journalReview article

Lung Diseases
Tumor Necrosis Factor-alpha
Pathology
Therapeutics
Pulmonary Fibrosis

Are fat NKT cells born that way?

Vieth, J. A. & Sant'Angelo, D., Aug 1 2017, In : Cellular and Molecular Immunology. 14, 8, p. 658-661 4 p.

Research output: Contribution to journalReview article

Natural Killer T-Cells
Adipocytes
160 Citations (Scopus)

Autophagy and Tumor Metabolism

Kimmelman, A. C. & White, E., May 2 2017, In : Cell Metabolism. 25, 5, p. 1037-1043 7 p.

Research output: Contribution to journalReview article

Autophagy
Neoplasms
Pathologic Processes
Growth
Clinical Trials
6 Citations (Scopus)

BAG3 plays a central role in proteostasis in the heart

Mizushima, W. & Sadoshima, J., Aug 1 2017, In : Journal of Clinical Investigation. 127, 8, p. 2900-2903 4 p.

Research output: Contribution to journalReview article

Proto-Oncogene Proteins c-bcl-2
Huntington Disease
Dilated Cardiomyopathy
Heart Diseases
Alzheimer Disease
12 Citations (Scopus)

Biotic Host–Pathogen Interactions As Major Drivers of Plastid Endosymbiosis

Cenci, U., Bhattacharya, D., Weber, A. P. M., Colleoni, C., Subtil, A. & Ball, S. G., Apr 1 2017, In : Trends in Plant Science. 22, 4, p. 316-328 13 p.

Research output: Contribution to journalReview article

cytosol
symbiosis
plastids
Chlamydiales
host-pathogen relationships
9 Citations (Scopus)

Biotic interactions as drivers of algal origin and evolution

Brodie, J., Ball, S. G., Bouget, F. Y., Chan, C. X., De Clerck, O., Cock, J. M., Gachon, C., Grossman, A. R., Mock, T., Raven, J. A., Saha, M., Smith, A. G., Vardi, A., Yoon, H. S. & Bhattacharya, D., Nov 1 2017, In : The New phytologist. 216, 3, p. 670-681 12 p.

Research output: Contribution to journalReview article

algae
Ecosystem
Coral Reefs
Eutrophication
Knowledge Bases

Cancer Chemoprevention: What Have we Learned?

Yang, C. S., Wang, H., Dan, V. & Filippo, S. S., Dec 1 2017, In : Current Pharmacology Reports. 3, 6, p. 409-422 14 p.

Research output: Contribution to journalReview article

Chemoprevention
Tamoxifen
Aspirin
Neoplasms
Beverages
27 Citations (Scopus)

Contribution of type III interferons to antiviral immunity: Location, location, location

Kotenko, S. V. & Durbin, J. E., May 5 2017, In : Journal of Biological Chemistry. 292, 18, p. 7295-7303 9 p.

Research output: Contribution to journalReview article

Interferon Type I
Adaptive Immunity
Virus Diseases
Viruses
Innate Immunity
13 Citations (Scopus)

Efferocytosis of dying cells differentially modulate immunological outcomes in tumor microenvironment

Kumar, S., Calianese, D. & Birge, R. B., Nov 2017, In : Immunological Reviews. 280, 1, p. 149-164 16 p.

Research output: Contribution to journalReview article

Tumor Microenvironment
Cell Death
Phagocytes
Apoptosis
Immunity
6 Citations (Scopus)
Microbiota
Crohn Disease
Homeostasis
Pattern Recognition Receptors
Inflammatory Bowel Diseases
21 Citations (Scopus)

Mechanical control of growth: Ideas, facts and challenges

Irvine, K. & Shraiman, B. I., Dec 1 2017, In : Development (Cambridge). 144, 23, p. 4238-4248 11 p.

Research output: Contribution to journalReview article

Growth
Mechanical Stress
Morphogenesis
Biological Phenomena
Physics
12 Citations (Scopus)
Peroxisome Proliferator-Activated Receptors
Metabolomics
Cardiomegaly
Epigenomics
Heart Failure
59 Citations (Scopus)

Metabolite measurement: Pitfalls to avoid and practices to follow

Lu, W., Su, X., Klein, M. S., Lewis, I. A., Fiehn, O. & Rabinowitz, J. D., Jun 20 2017, In : Annual review of biochemistry. 86, p. 277-304 28 p.

Research output: Contribution to journalReview article

Metabolites
Gas Chromatography-Mass Spectrometry
Metabolomics
Knowledge Bases
Water
13 Citations (Scopus)

Modulation of signaling mechanisms in the heart by thioredoxin 1

Nagarajan, N., Oka, S. & Sadoshima, J., Aug 2017, In : Free Radical Biology and Medicine. 109, p. 125-131 7 p.

Research output: Contribution to journalReview article

Thioredoxins
Modulation
Myocardial Reperfusion
NADP
Myocardial Ischemia
8 Citations (Scopus)

Role of FXR in Liver Inflammation During Nonalcoholic Steatohepatitis

Armstrong, L. E. & Guo, G. L., Apr 1 2017, In : Current Pharmacology Reports. 3, 2, p. 92-100 9 p.

Research output: Contribution to journalReview article

Liver
Inflammation
Chemical activation
Liver X Receptors
Non-alcoholic Fatty Liver Disease
23 Citations (Scopus)

SERPINB3 and B4: From biochemistry to biology

Sun, Y., Sheshadri, N. & Zong, W. X., Feb 1 2017, In : Seminars in Cell and Developmental Biology. 62, p. 170-177 8 p.

Research output: Contribution to journalReview article

Biochemistry
Cysteine Proteinase Inhibitors
Serine Proteinase Inhibitors
Gene Duplication
Substrate Specificity
18 Citations (Scopus)

The Algal Revolution

Brodie, J., Chan, C. X., De Clerck, O., Cock, J. M., Coelho, S. M., Gachon, C., Grossman, A. R., Mock, T., Raven, J. A., Smith, A. G., Yoon, H. S. & Bhattacharya, D., Aug 2017, In : Trends in Plant Science. 22, 8, p. 726-738 13 p.

Research output: Contribution to journalReview article

algae
biofuels
functional foods
eukaryotic cells
phenotype
31 Citations (Scopus)

The role of bile acids in nonalcoholic fatty liver disease and nonalcoholic steatohepatitis

Chow, M. D., Lee, Y-H. & Guo, G., Aug 1 2017, In : Molecular Aspects of Medicine. 56, p. 34-44 11 p.

Research output: Contribution to journalReview article

Fatty Liver
Bile Acids and Salts
Liver
Fibrosis
Inflammation
28 Citations (Scopus)

TOR-mediated regulation of metabolism in aging

Antikainen, H., Driscoll, M., Haspel, G. & Dobrowolski, R., Dec 2017, In : Aging cell. 16, 6, p. 1219-1233 15 p.

Research output: Contribution to journalReview article

Autophagy
Food
Protein Deficiency
Cell Aging
Caenorhabditis elegans

Unexpected functional consequences of the loss of the autophagy-related conjugation system

Saito, T. & Sadoshima, J., Feb 17 2017, In : Circulation research. 120, 4, p. 610-612 3 p.

Research output: Contribution to journalReview article

Autophagy
Autophagosomes

What Should We Learn from the Recent Decline of Basic Cardiovascular Science in Japan?

Sadoshima, J. & Tomoike, H., Aug 4 2017, In : Circulation research. 121, 4, p. 314-316 3 p.

Research output: Contribution to journalReview article

2016
102 Citations (Scopus)

Aging and Autophagy in the Heart

Shirakabe, A., Ikeda, Y., Sciarretta, S., Zablocki, D. K. & Sadoshima, J., May 13 2016, In : Circulation research. 118, 10, p. 1563-1576 14 p.

Research output: Contribution to journalReview article

Autophagy
Proteins
Organelles
Mitochondria
Caloric Restriction
10 Citations (Scopus)

A novice’s guide to analyzing NGS-derived organelle and metagenome data

Song, H. J., Lee, J. M., Graf, L., Rho, M., Qiu, H., Bhattacharya, D. & Yoon, H. S., Jun 2016, In : Algae. 31, 2, p. 137-154 18 p.

Research output: Contribution to journalReview article

bioinformatics
organelles
genome
organelle genome
resource