Genomic Instability and Cancer Genetics Program, CINJ

Research Output 1973 2020

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Conference contribution
2017
3 Citations (Scopus)

Biomedical data analysis in translational research: Integration of expert knowledge and interpretable models

Bhanot, G., Biehl, M., Villmann, T. & Zühlke, D., Jan 1 2017, ESANN 2017 - Proceedings, 25th European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning. i6doc.com publication, p. 177-185 9 p. (ESANN 2017 - Proceedings, 25th European Symposium on Artificial Neural Networks, Computational Intelligence and Machine Learning).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Availability

Cancer nanomedicines: Opportunities and challenges

Tamarkin, L., Yuan, Z. Q., Maggi, E. C., Asha, A., Schorzman, A. N., Zamboni, W. C., Oarr, D. & Libutti, S. K., Jan 1 2017, Biotech, Biomaterials and Biomedical - TechConnect Briefs 2017. Case, F., Laudon, M., Case, F. & Romanowicz, B. (eds.). TechConnect, p. 126-129 4 p. (Advanced Materials - TechConnect Briefs 2017; vol. 3).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Nanomedicine
Medical nanotechnology
Tumors
Chemotherapy
Neoplasms
2016
3 Citations (Scopus)

Predicting recurrence in clear cell Renal Cell Carcinoma: Analysis of TCGA data using outlier analysis and generalized matrix LVQ

Mukherjee, G., Bhanot, G., Raines, K., Sastry, S., Doniach, S. & Biehl, M., Nov 14 2016, 2016 IEEE Congress on Evolutionary Computation, CEC 2016. Institute of Electrical and Electronics Engineers Inc., p. 656-661 6 p. 7743855. (2016 IEEE Congress on Evolutionary Computation, CEC 2016).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Atlas
Recurrence
Outlier
Cancer
Genome
3 Citations (Scopus)

The evolution of tumors in mice and humans with germline p53 mutations

Levine, A. J., Chan, C. S., Dudgeon, C., Puzio-Kuter, A. & Hainaut, P., Jan 1 2016, 21st Century Genetics Genes at Work, 2015. Grodzicker, T., Stillman, B. & Stewart, D. (eds.). Cold Spring Harbor Laboratory Press, p. 139-145 7 p. (Cold Spring Harbor Symposia on Quantitative Biology; vol. 80).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Germ-Line Mutation
Tumors
Genes
p53 Genes
Clone Cells
2014

From rna replicators to genes to survival machines with brains

Bhanot, G., Jan 1 2014, Brain-Inspired Computing - International Workshop, BrainComp 2013, Revised Selected Papers. Lippert, T., Petkov, N., Grandinetti, L. & Lippert, T. (eds.). Springer Verlag, p. 15-21 7 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8603).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Brain
Dynamical systems
Genes
Complex Dynamical Systems
Gene
7 Citations (Scopus)

Moduli spaces of phylogenetic trees describing tumor evolutionary patterns

Zairis, S., Khiabanian, H., Blumberg, A. J. & Rabadan, R., Jan 1 2014, Brain Informatics and Health - International Conference, BIH 2014, Proceedings. Springer Verlag, p. 528-539 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 8609 LNAI).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Phylogenetic Tree
Moduli Space
Tumors
Tumor
Cancer
2009
8 Citations (Scopus)

Expectation Maximization driven Geodesic Active Contour with Overlap Resolution (EMaGACOR): Application to lymphocyte segmentation on breast cancer histopathology

Fatakdawala, H., Basavanhally, A., Xu, J., Bhanot, G., Ganesan, S., Feldman, M., Tomaszewski, J. & Madabhushi, A., Nov 18 2009, Proceedings of the 2009 9th IEEE International Conference on Bioinformatics and BioEngineering, BIBE 2009. p. 69-76 8 p. 5211319. (Proceedings of the 2009 9th IEEE International Conference on Bioinformatics and BioEngineering, BIBE 2009).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Lymphocytes
Aptitude
Infiltration
Breast Neoplasms
Artifacts
2007
13 Citations (Scopus)

Reconstructing signal transduction pathways: Challenges and opportunities

Levine, A. J., Hu, W., Feng, Z. & Gil, G., Dec 2007, Reverse Engineering Biological Networks: Opportunities and Challenges in Computational Methods for Pathway Inference. Blackwell Publishing Inc., p. 32-50 19 p. (Annals of the New York Academy of Sciences; vol. 1115).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Signal transduction
Signal Transduction
Genes
Biochemistry
Molecular biology
2006
3 Citations (Scopus)

Using emerging genome data to identify conserved bone morphogenetic protein (Bmp) 2 gene expression mechanisms

Hu, J., Tian, B., Fritz, D. T. & Rogers, M. B., Dec 1 2006, CIKM 2006 Workshop - Proceedings of TMBIO 2006: ACM First International Workshop on Text Mining in Bioinformatics. p. 15-20 6 p. (Proceedings of TMBIO 2006: ACM First International Workshop on Text Mining in Bioinformatics).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Bone Morphogenetic Protein 2
Gene expression
Bone
Genes
Tetraodontiformes
2005
7 Citations (Scopus)

A robust meta-classification strategy for cancer diagnosis from gene expression data

Alexe, G., Ramaswamy, R., Bhanot, G., Lepre, J., Stolovitzky, G., Venkataraghavan, B. & Levine, A. J., Dec 1 2005, Proceedings - 2005 IEEE Computational SystemsBioinformatics Conference, CSB 2005. p. 322-325 4 p. 1498033. (Proceedings - 2005 IEEE Computational Systems Bioinformatics Conference, CSB 2005; vol. 2005).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Neoplasm Genes
Gene expression
Genes
Gene Expression
Microarrays
18 Citations (Scopus)

Multiple pathways tether telomeres and silent chromatin at the nuclear periphery: Functional implications for Sir-mediated repression

Taddei, A., Gartenberg, M. R., Neumann, F. R., Hediger, F. & Gasser, S. M., Dec 1 2005, Nuclear Organization in Development and Disease. p. 140-156 17 p. (Novartis Foundation Symposium; vol. 264).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Telomere
Chromatin
Nuclear Envelope
Cytological Techniques
Interphase
1997

Integrating heterogeneous datasets in genomic mapping: Radiation hybrids, YACs, genes and STS markers over the entire human chromosome X

Grigoriev, A., Kumlien, J. & Lehrach, H., Jan 1 1997, Bioinformatics - German Conference on Bioinformatics, GCB 1996, Selected Papers. Lengauer, T., Hofestädt, R., Schomburg, D. & Löffier, M. (eds.). Springer Verlag, p. 106-114 9 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 1278).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Chromosomes
Chromosome
Genomics
Genes
Radiation
1993

Preliminary results of laser tissue welding in extravesical reimplantation of the ureters

Kirsch, A. J. M. D., Milton, D. T., Dean, G. E., Oz, M. C. M. D., Libutti, S. K. M. D. & et.al., Jan 1 1993, Proceedings of SPIE - The International Society for Optical Engineering. Publ by Society of Photo-Optical Instrumentation Engineers, p. 168-174 7 p. (Proceedings of SPIE - The International Society for Optical Engineering; vol. 1876).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

welding
Soldering alloys
closures
Muscle
Welding