Genomic Instability and Cancer Genetics Program, CINJ

Research Output 1973 2020

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Comment/debate
2019

New means to an end: mRNA export activity impacts alternative polyadenylation

Shin, J., Cheng, H. & Tian, B., Oct 20 2019, In : Transcription. 10, 4-5, p. 207-211 5 p.

Research output: Contribution to journalComment/debate

Polyadenylation
Cell Nucleus Active Transport
Genes
Messenger RNA
RNA Polymerase II

XLF extends its range from DNA repair to replication

Gonzalez-Rodriguez, Y. & Bunting, S. F., Jul 1 2019, In : The Journal of cell biology. 218, 7, p. 2075-2076 2 p.

Research output: Contribution to journalComment/debate

Open Access
DNA Replication
DNA Repair
2018
Open Access
Nucleic Acids
Research
3 Citations (Scopus)

Erratum: De Novo Sequence and Copy Number Variants Are Strongly Associated with Tourette Disorder and Implicate Cell Polarity in Pathogenesis (Cell Reports (2018) 24(13) (3441–3454.e12), (S221112471831386X), (10.1016/j.celrep.2018.08.082))

Tourette International Collaborative Genetics Study (TIC Genetics), Tourette Syndrome Genetics Southern and Eastern Europe Initiative (TSGENESEE), Tourette Association of America International Consortium for Genetics (TAAICG), Tourette International Collaborative Genetics Study (TIC Genetics), Tourette Syndrome Genetics Southern and Eastern Europe Initiative (TSGENESEE) & Tourette Association of America International Consortium for Genetics (TAAICG), Dec 18 2018, In : Cell Reports. 25, 12, 1 p.

Research output: Contribution to journalComment/debate

Tourette Syndrome
Cell Polarity

The BLM Helicase: Keeping recombination honest?

Her, J., Ray, C. & Bunting, S. F., Feb 16 2018, In : Cell Cycle. 17, 4, p. 401-402 2 p.

Research output: Contribution to journalComment/debate

Genetic Recombination
2017
4 Citations (Scopus)

Lightning-fast genome variant detection with GROM

Smith, S. D., Kawash, J. K. & Grigoriev, A., Jan 1 2017, In : GigaScience. 6, 10, p. 1-7 7 p.

Research output: Contribution to journalComment/debate

Lightning
Genes
Genome
Human Genome
Exome
2016
8 Citations (Scopus)

Erratum: Gene expression in major depressive disorder (Molecular Psychiatry (2015) DOI: 10.1038/mp.2015.57)

Jansen, R., Penninx, B. W. J. H., Madar, V., Xia, K., Milaneschi, Y., Hottenga, J. J., Hammerschlag, A. R., Beekman, A., Van Der Wee, N., Smit, J. H., Brooks, A. I., Tischfield, J., Posthuma, D., Schoevers, R., Van Grootheest, G., Willemsen, G., De Geus, E. J., Boomsma, D. I., Wright, F. A., Zou, F. & 2 others, Sun, W. & Sullivan, P. F., Mar 1 2016, In : Molecular psychiatry. 21, 3, 1 p.

Research output: Contribution to journalComment/debate

Major Depressive Disorder
Psychiatry
Gene Expression
3 Citations (Scopus)

Erratum: Rational design of a parthenolide-based drug regimen that selectively eradicates acute myelogenous leukemia stem cells (Journal of Biological Chemistry (2016) 291 (21984-22000) DOI: 10.1074/jbc.M116.750653)

Pei, S., Minhajuddin, M., D'Alessandro, A., Nemkov, T., Stevens, B. M., Adane, B., Khan, N., Hagen, F. K., Yadav, V. K., De, S., Ashton, J. M., Hansen, K. C., Gutman, J. A., Pollyea, D. A., Crooks, P. A., Smith, C. & Jordan, C. T., Nov 25 2016, In : Journal of Biological Chemistry. 291, 48, 1 p.

Research output: Contribution to journalComment/debate

Conflict of Interest
Stem cells
Acute Myeloid Leukemia
Stem Cells
Pharmaceutical Preparations
2015

Erratum for Verzi et al., Intestinal Master Transcription Factor CDX2 Controls Chromatin Access for Partner Transcription Factor Binding [Volume 33, no. 2, p. 281-292, 2013]

Verzi, M. P., Shin, H., San Roman, A. K., Liu, S. S. & Shivdasania, R. A., Jan 1 2015, In : Molecular and cellular biology. 35, 2, p. 496 1 p.

Research output: Contribution to journalComment/debate

Chromatin
Transcription Factors
CDX2 Transcription Factor
2014
39 Citations (Scopus)

Cancer nanomedicines: Closing the translational gap

Gabizon, A., Bradbury, M., Prabhakar, U., Zamboni, W., Libutti, S. & Grodzinski, P., Dec 27 2014, In : The Lancet. 384, 9961, p. 2175-2176 2 p.

Research output: Contribution to journalComment/debate

Drug Legislation
Nanomedicine
Precision Medicine
Preclinical Drug Evaluations
Drug Delivery Systems

Correction: BSP gene silencing inhibits migration, invasion, and bone metastasis of MDA-MB-231BO human breast cancer cells (PLoS ONE)

Wang, J., Wang, L., Xia, B., Yang, C., Lai, H. & Chen, X., Jan 6 2014, In : PloS one. 9, 1

Research output: Contribution to journalComment/debate

Gene Silencing
gene silencing
metastasis
breast neoplasms
bones
12 Citations (Scopus)

Degradation of specific nuclear proteins occurs in the cytoplasm in Saccharomyces cerevisiae

Chen, L. & Madura, K., May 2014, In : Genetics. 197, 1, p. 193-197 5 p.

Research output: Contribution to journalComment/debate

Cell Nucleus Active Transport
Nuclear Proteins
Saccharomyces cerevisiae
Cytoplasm
Proteasome Endopeptidase Complex

Erratum: News from the protein mutability landscape (Journal of Molecular Biology (2013) 425 (3937-3948))

Hecht, M., Bromberg, Y. & Rost, B., Jan 23 2014, In : Journal of molecular biology. 426, 2, 1 p.

Research output: Contribution to journalComment/debate

Molecular Biology
Proteins

Erratum to Differentiation-specific histone modifications reveal dynamic chromatin interactions and partners for the intestinal transcription factor CDX2 [Developmental Cell, 19, (2010), 713-726]

Verzi, M. P., Shin, H., He, H., Sulahian, R., Meyer, C. A., Montgomery, R. K., Fleet, J. C., Brown, M., Liu, X. S. & Shivdasani, R. A., Dec 22 2014, In : Developmental Cell. 31, 6, 1 p.

Research output: Contribution to journalComment/debate

Histone Code
Chromatin
CDX2 Transcription Factor
2013
4 Citations (Scopus)

Cancer biomarkers and targeted therapies

Shen, Z., Feb 6 2013, In : Cell and Bioscience. 3, 1, 6.

Research output: Contribution to journalComment/debate

Tumor Biomarkers

Erratum: U1 adaptor oligonucleotides targeting BCL2 and GRM1 suppress growth of human melanoma xenografts in vivo (Molecular Therapy - Nucleic Acids (2013) 2 (e111) DOI: 10.1038/mtna.2013.44)

Goraczniak, R., Wall, B. A., Behlke, M. A., Lennox, K. A., Ho, E. S., Zaphiros, N. H., Jakubowski, C., Patel, N. R., Zhao, S., Magaway, C., Subbie, S. A., Yu, L. J., LaCava, S., Reuhl, K. R., Chen, S. & Gunderson, S. I., Jul 29 2013, In : Molecular Therapy - Nucleic Acids. 2, e111.

Research output: Contribution to journalComment/debate

Heterografts
Oligonucleotides
Nucleic Acids
Melanoma
Growth
2012
2 Citations (Scopus)

Erratum: Telomeric DNA damage is irreparable and causes persistent DNA-damage-response activation (Nature Cell Biology (2012) 14 (355-365))

Fumagalli, M., Rossiello, F., Clerici, M., Barozzi, S., Cittaro, D., Kaplunov, J. M., Bucci, G., Dobreva, M., Matti, V., Beausejour, C. M., Herbig, U., Longhese, M. P. & D'Adda Di Fagagna, F., May 1 2012, In : Nature Cell Biology. 14, 5, 1 p.

Research output: Contribution to journalComment/debate

DNA Damage
Cell Biology
2011

Aurora kinase roles in idiosyncratic mitoses: The same, but different

Schindler, K., Jan 1 2011, In : Cell Cycle. 10, 1, p. 23-22 2 p.

Research output: Contribution to journalComment/debate

Aurora Kinases
Mitosis

Erratum: Doppler ambiguity resolving for SAR moving targets via linear migration correction (Electronics Letters 47:7 (464-465))

Xia, B., Xu, J., Peng, Y. N., Xia, X. G. & Tang, J., Aug 18 2011, In : Electronics Letters. 47, 17, 1 p.

Research output: Contribution to journalComment/debate

Electronic equipment
8 Citations (Scopus)

Exposure to low level environmental agents: The induction of hormesis

Azzam, E., Dec 24 2011, In : Mutation Research - Genetic Toxicology and Environmental Mutagenesis. 726, 2, p. 89-90 2 p.

Research output: Contribution to journalComment/debate

Hormesis
Mutagenicity Tests
Mutagens
2010

Corrigendum: A systematic gene-based screen of chr4q22-q32 identifies association of a novel susceptibility gene, DKK2, with the quantitative trait of alcohol dependence symptom counts

Kalsi, G., Kuo, P. H., Aliev, F., Alexander, J., McMichael, O., Patterson, D. G., Walsh, D., Zhao, Z., Schuckit, M., Nurnberger, J., Edenberg, H., Kramer, J., Hesselbrock, V., Tischfield, J. A., Vladimirov, V., Prescott, C. A., Dick, D. M., Kendler, K. S. & Riley, B. P., Aug 10 2010, In : Human molecular genetics. 19, 20, 1 p., ddq326.

Research output: Contribution to journalComment/debate

Erratum: MuD: An interactive web server for the prediction of non-neutral substitutions using protein structural data (Nucleic Acids Research (2010) 38 (W523-W528) DOI:10.1093/nar/gkq528)

Wainreb, G., Ashkenazy, H., Bromberg, Y., Starovolsky-Shitrit, A., Haliloglu, T., Ruppin, E., Avraham, K. B., Rost, B. & Ben-Tal, N., Jan 1 2010, In : Nucleic acids research. 38, 21, 1 p.

Research output: Contribution to journalComment/debate

Nucleic Acids
Research
Proteins
2009
1 Citation (Scopus)
DNA-Directed RNA Polymerases
Yeasts
mitochondrial RNA
2 Citations (Scopus)
Reaction intermediates
Fluorophores
Transcription
Trajectories
2004
3 Citations (Scopus)

Do angiogenesis inhibitors perform a physiologic gatekeeper role in cancer prevention?

Libutti, S. K., Jan 1 2004, In : Cancer Journal. 10, 1, p. 12-14 3 p.

Research output: Contribution to journalComment/debate

Pathologic Neovascularization
Thrombospondin 1
Angiogenesis Inhibitors
Neoplasms
Viruses
Hepacivirus
Molecules

Erratum: Gene expression for thyroid tumor classification (Cancer Research (April 15, 2004) 64, 1 (2898-2903))

Mazzanti, C., Zeiger, M. A., Costouros, N. G., Umbricht, C., Westra, W. H., Smith, D., Somervell, H., Bevilacqua, G., Alexander, H. R. & Libutti, S. K., Jul 15 2004, In : Cancer Research. 64, 14, 1 p.

Research output: Contribution to journalComment/debate

Thyroid Gland
Gene Expression
Research
Neoplasms
1997
3 Citations (Scopus)

Genomes with a view.

Grigoriev, A., Dec 1997, In : Trends in genetics : TIG. 13, 12, 1 p.

Research output: Contribution to journalComment/debate

Factual Databases
User-Computer Interface
Computer Communication Networks
Software
Genome
1994
1 Citation (Scopus)

An A to G polymorphism in the SHBG gene

Xu, Y. & Li, H., Aug 1 1994, In : Human molecular genetics. 3, 8, 1 p.

Research output: Contribution to journalComment/debate

Molecular Sequence Data
Sex Hormone-Binding Globulin
Polymerase Chain Reaction
Oligodeoxyribonucleotides
Polymerase chain reaction
13 Citations (Scopus)

Missense mutation in the adenine phosphoribosyltransferase gene causing 2, 8-dihydroxyadenine urolithiasis

Sahota, A., Chen, J., Boyadjiev, S. A., Gault, M. H. & Tischfield, J. A., May 1 1994, In : Human molecular genetics. 3, 5, p. 817-818 2 p.

Research output: Contribution to journalComment/debate