Research output per year
Research output per year
Research output
- 1 - 50 out of 819 results
Search results
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2025
Identification of an antibiotic from an HTS targeting EF-Tu:tRNA interaction: a prospective topical treatment for MRSA skin infections
Mandecki, W., Chudaev, M., Ye, W., Wang, A. Q., Wilson, K. J., Xu, X., Kim, J., Parker, D., Alland, D., Kumar, P., Li, B., Yang, J. H., Kreiswirth, B., Mediavilla, J. R., Marugan, J. J., Henderson, M. J. & Goldman, E., Jan 2025, In: Applied and environmental microbiology. 91, 1Research output: Contribution to journal › Article › peer-review
Open Access -
2024
Natural regeneration or tree planting in a tropical forest-to-pasture damaged area: which is more efficacious for soil ecosystem recovery?
Eaton, W. D., Hamilton, D. A., Lemenze, A. & Soteropoulos, P., May 2024, In: Restoration Ecology. 32, 4, e14127.Research output: Contribution to journal › Article › peer-review
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NFAT5 governs cellular plasticity-driven resistance to KRAS-targeted therapy in pancreatic cancer
Deng, D., Begum, H., Liu, T., Zhang, J., Zhang, Q., Chu, T. Y., Li, H., Lemenze, A., Hoque, M., Soteropoulos, P. & Hou, P., Nov 4 2024, In: Journal of Experimental Medicine. 221, 11, e20240766.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
Structure-Activity Relationship of a Pyrrole Based Series of PfPKG Inhibitors as Anti-Malarials
Gilleran, J. A., Ashraf, K., Delvillar, M., Eck, T., Fondekar, R., Miller, E. B., Hutchinson, A., Dong, A., Seitova, A., De Souza, M. L., Augeri, D., Halabelian, L., Siekierka, J., Rotella, D. P., Gordon, J., Childers, W. E., Grier, M. C., Staker, B. L., Roberge, J. Y. & Bhanot, P., Mar 14 2024, In: Journal of medicinal chemistry. 67, 5, p. 3467-3503 37 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations -
The cellular Notch1 protein promotes KSHV reactivation in an Rta-dependent manner
DeCotiis-Mauro, J., Han, S. M., Mello, H., Goyeneche, C., Marchesini-Tovar, G., Jin, L., Bellofatto, V. & Lukac, D. M., Aug 2024, In: Journal of virology. 98, 8Research output: Contribution to journal › Article › peer-review
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Time-Course Progression of Whole Transcriptome Expression Changes of Trigeminal Ganglia Compared to Dorsal Root Ganglia in Rats Exposed to Nerve Injury
Korczeniewska, O. A., Husain, S., Hoque, M., Soteropoulos, P., Khan, J., Eliav, E. & Benoliel, R., Jan 2024, In: Journal of Pain. 25, 1, p. 101-117 17 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Use of high throughput DNA analysis to characterize the nodule-associated bacterial community from four ages of Inga punctata trees in a Costa Rican cloud forest
Eaton, W. D., Hamilton, D. A., Chen, W., Lemenze, A. & Soteropoulos, P., 2024, In: AIMS Microbiology. 10, 3, p. 572-595 24 p.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
2023
Cytomegalovirus-vectored COVID-19 vaccines elicit neutralizing antibodies against the SARS-CoV-2 Omicron variant (BA.2) in mice
Liu, J., Jaijyan, D. K., Chen, Y., Feng, C., Yang, S., Xu, Z., Zhan, N., Hong, C., Li, S., Cheng, T. & Zhu, H., Dec 2023, In: Microbiology Spectrum. 11, 6Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Efficacy of Grignard Pure to Inactivate Airborne Phage MS2, a Common SARS-CoV-2 Surrogate
Desai, G., Ramachandran, G., Goldman, E., Esposito, W., Galione, A., Lal, A., Choueiri, T. K., Fay, A., Jordan, W., Schaffner, D. W., Caravanos, J., Grignard, E. & Mainelis, G., Mar 14 2023, In: Environmental Science and Technology. 57, 10, p. 4231-4240 10 p.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Identification of covalent fragment inhibitors for Plasmodium falciparum UCHL3 with anti-malarial efficacy
Imhoff, R. D., Rosenthal, M. R., Ashraf, K., Bhanot, P., Ng, C. L. & Flaherty, D. P., Oct 1 2023, In: Bioorganic and Medicinal Chemistry Letters. 94, 129458.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Rationally designed synthetic vectors for therapeutic nucleic acid delivery against human cytomegalovirus infection
Ge, X., Jaijyan, D. K., Wang, W., Cheng, T., Tang, Q., Wu, F., Jin, T. & Zhu, H., Mar 2023, In: Journal of Medical Virology. 95, 3, e28586.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
The RNA-binding protein RBP42 regulates cellular energy metabolism in mammalian-infective Trypanosoma brucei
Das, A., Liu, T., Li, H. & Husain, S., 2023, In: mSphere. 8, 5Research output: Contribution to journal › Article › peer-review
Open Access -
2022
24-nt phasiRNAs move from tapetal to meiotic cells in maize anthers
Zhou, X., Huang, K., Teng, C., Abdelgawad, A., Batish, M., Meyers, B. C. & Walbot, V., Jul 2022, In: New Phytologist. 235, 2, p. 488-501 14 p.Research output: Contribution to journal › Article › peer-review
Open Access22 Scopus citations -
A chemical method for generating live-attenuated, replication-defective DNA viruses for vaccine development
Jaijyan, D. K., Govindasamy, K., Lee, M. & Zhu, H., Sep 19 2022, In: Cell Reports Methods. 2, 9, 100287.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
An alternative approach—combination of lockdown and open in fighting COVID-19 pandemics
Yao, L., Aleya, L., Goldman, E., Graff, J. C. & Gu, W., Nov 2022, In: Environmental Science and Pollution Research. 29, 54, p. 82611-82614 4 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Apiaceous vegetables protect against acrolein-induced pulmonary injuries through modulating hepatic detoxification and inflammation in C57BL/6 male mice
Redding, M. C., Pan, J. H., Kim, Y. J., Batish, M., Trabulsi, J., Lee, J. H. & Kim, J. K., Mar 2022, In: Journal of Nutritional Biochemistry. 101, 108939.Research output: Contribution to journal › Article › peer-review
1 Scopus citations -
A Role for Basigin in Toxoplasma gondii Infection
Nasuhidehnavi, A., Zhao, Y., Punetha, A., Hemphill, A., Li, H., Bechtel, T. J., Rager, T., Xiong, B., Petrou, V. I., Gubbels, M. J., Weerapana, E. & Yap, G. S., Aug 2022, In: Infection and immunity. 90, 8Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Characterization of Competitive Inhibitors of Plasmodium falciparum cGMP-Dependent Protein Kinase**
Eck, T., Laureano de Souza, M., Delvillar, M., Ashraf, K., Yadav Bheemanaboina, R. R., Chakrasali, R., Kreiss, T., Siekierka, J. J., Rotella, D. P., Bhanot, P. & Goodey, N. M., Apr 5 2022, In: ChemBioChem. 23, 7, e202100704.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
CircFISH: A Novel Method for the Simultaneous Imaging of Linear and Circular RNAs
Koppula, A., Abdelgawad, A., Guarnerio, J., Batish, M. & Parashar, V., Jan 1 2022, In: Cancers. 14, 2, 428.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
Circular RNAs Represent a Novel Class of Human Cytomegalovirus Transcripts
Yang, S., Liu, X., Wang, M., Cao, D., Jaijyan, D. K., Enescu, N., Liu, J., Wu, S., Wang, S., Sun, W., Xiao, L., Gu, A., Li, Y., Zhou, H., Tyagi, S., Wu, J., Tang, Q. & Zhu, H., Jun 2022, In: Microbiology Spectrum. 10, 3Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Comprehensive Analysis of Disease Pathology in Immunocompetent and Immunocompromised Hosts following Pulmonary SARS-CoV-2 Infection
Ramasamy, S., Kolloli, A., Kumar, R., Husain, S., Soteropoulos, P., Chang, T. L. & Subbian, S., Jun 2022, In: Biomedicines. 10, 6, 1343.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Cutting Edge: Neutrophils License the Maturation of Monocytes into Effective Antifungal Effectors
Espinosa, V., Dutta, O., Heung, L. J., Wang, K., Chang, Y. J., Soteropoulos, P., Hohl, T. M., Siracusa, M. C. & Rivera, A., Nov 15 2022, In: Journal of Immunology. 209, 10, p. 1827-1831 5 p.Research output: Contribution to journal › Article › peer-review
Open Access11 Scopus citations -
Development of a skin- and neuro-attenuated live vaccine for varicella
Wang, W., Pan, D., Fu, W., Ye, X., Han, J., Yang, L., Jia, J., Liu, J., Zhu, R., Zhang, Y., Liu, C., Ye, J., Selariu, A., Que, Y., Zhao, Q., Wu, T., Li, Y., Zhang, J., Cheng, T. & Zhu, H. & 1 others, , Dec 2022, In: Nature communications. 13, 1, 824.Research output: Contribution to journal › Article › peer-review
Open Access16 Scopus citations -
Exon skipping induced by CRISPR-directed gene editing regulates the response to chemotherapy in non-small cell lung carcinoma cells
Banas, K., Modarai, S., Rivera-Torres, N., Yoo, B. C., Bialk, P. A., Barrett, C., Batish, M. & Kmiec, E. B., Jun 2022, In: Gene therapy. 29, 6, p. 357-367 11 p.Research output: Contribution to journal › Article › peer-review
Open Access11 Scopus citations -
Gut Microbial Shifts Indicate Melanoma Presence and Bacterial Interactions in a Murine Model
Rossi, M., Aspromonte, S. M., Kohlhapp, F. J., Newman, J. H., Lemenze, A., Pepe, R. J., Defina, S. M., Herzog, N. L., Donnelly, R., Kuzel, T. M., Reiser, J., Guevara-Patino, J. A. & Zloza, A., Apr 2022, In: Diagnostics. 12, 4, 958.Research output: Contribution to journal › Article › peer-review
Open Access2 Scopus citations -
Lamarck redux and other false arguments against SARS-CoV-2 vaccination: Pseudoscientific arguments against vaccination do not stand up to scrutiny
Goldman, E., Apr 5 2022, In: EMBO Reports. 23, 4, e54675.Research output: Contribution to journal › Article › peer-review
Open Access1 Scopus citations -
Lipid-Polymer Hybrid “Particle-in-Particle” Nanostructure Gene Delivery Platform Explored for Lyophilizable DNA and mRNA COVID-19 Vaccines
Li, Z., Zhang, X. Q., Ho, W., Bai, X., Jaijyan, D. K., Li, F., Kumar, R., Kolloli, A., Subbian, S., Zhu, H. & Xu, X., Oct 5 2022, In: Advanced Functional Materials. 32, 40, 2204462.Research output: Contribution to journal › Article › peer-review
Open Access34 Scopus citations -
Neuroprotective Effects of Cranberry Juice Treatment in a Rat Model of Parkinson’s Disease
Witucki, Ł., Kurpik, M., Jakubowski, H., Szulc, M., Mikołajczak, P. Ł., Jodynis-Liebert, J. & Kujawska, M., May 1 2022, In: Nutrients. 14, 10, 2014.Research output: Contribution to journal › Article › peer-review
Open Access12 Scopus citations -
Neutralization Epitopes in Trimer and Pentamer Complexes Recognized by Potent Cytomegalovirus-Neutralizing Human Monoclonal Antibodies
Ai, Y., Wu, C., Zhang, M., Jaijyan, D. K., Liu, T., Zan, L., Li, N., Yu, W., Wang, Y., Yuan, X., Li, C., Zheng, W., Zhu, H. & Liao, H. X., Nov 2022, In: Microbiology Spectrum. 10, 6Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
New intranasal and injectable gene therapy for healthy life extension
Jaijyan, D. K., Selariu, A., Cruz-Cosme, R., Tong, M., Yang, S., Stefa, A., Kekich, D., Sadoshima, J., Herbig, U., Tang, Q., Church, G., Parrish, E. L. & Zhu, H., May 17 2022, In: Proceedings of the National Academy of Sciences of the United States of America. 119, 20, e2121499119.Research output: Contribution to journal › Article › peer-review
Open Access40 Scopus citations -
Phage defence by deaminase-mediated depletion of deoxynucleotides in bacteria
Hsueh, B. Y., Severin, G. B., Elg, C. A., Waldron, E. J., Kant, A., Wessel, A. J., Dover, J. A., Rhoades, C. R., Ridenhour, B. J., Parent, K. N., Neiditch, M. B., Ravi, J., Top, E. M. & Waters, C. M., Aug 2022, In: Nature Microbiology. 7, 8, p. 1210-1220 11 p.Research output: Contribution to journal › Article › peer-review
Open Access45 Scopus citations -
SARS-CoV-2, SARS-CoV, and MERS-CoV encode circular RNAs of spliceosome-independent origin
Yang, S., Zhou, H., Liu, M., Jaijyan, D., Cruz-Cosme, R., Ramasamy, S., Subbian, S., Liu, D., Xu, J., Niu, X., Li, Y., Xiao, L., Tyagi, S., Wang, Q., Zhu, H. & Tang, Q., Jul 2022, In: Journal of Medical Virology. 94, 7, p. 3203-3222 20 p.Research output: Contribution to journal › Article › peer-review
Open Access20 Scopus citations -
Sciatic–Vagal Nerve Stimulation by Electroacupuncture Alleviates Inflammatory Arthritis in Lyme Disease-Susceptible C3H Mice
Akoolo, L., Djokic, V., Rocha, S. C., Ulloa, L. & Parveen, N., Jul 18 2022, In: Frontiers in immunology. 13, 930287.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Structural basis for HCMV Pentamer recognition by neuropilin 2 and neutralizing antibodies
Wrapp, D., Ye, X., Ku, Z., Su, H., Jones, H. G., Wang, N., Mishra, A. K., Freed, D. C., Li, F., Tang, A., Li, L., Jaijyan, D. K., Zhu, H., Wang, D., Fu, T. M., Zhang, N., An, Z. & McLellan, J. S., Mar 2022, In: Science Advances. 8, 10, eabm2546.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
Structural basis of cyclic oligoadenylate binding to the transcription factor Csa3 outlines cross talk between type III and type I CRISPR systems
Xia, P., Dutta, A., Gupta, K., Batish, M. & Parashar, V., Feb 1 2022, In: Journal of Biological Chemistry. 298, 2, 101591.Research output: Contribution to journal › Article › peer-review
Open Access5 Scopus citations -
Structural basis of lipopolysaccharide maturation by the O-antigen ligase
Ashraf, K. U., Nygaard, R., Vickery, O. N., Erramilli, S. K., Herrera, C. M., McConville, T. H., Petrou, V. I., Giacometti, S. I., Dufrisne, M. B., Nosol, K., Zinkle, A. P., Graham, C. L. B., Loukeris, M., Kloss, B., Skorupinska-Tudek, K., Swiezewska, E., Roper, D. I., Clarke, O. B., Uhlemann, A. C. & Kossiakoff, A. A. & 3 others, , Apr 14 2022, In: Nature. 604, 7905, p. 371-376 6 p.Research output: Contribution to journal › Article › peer-review
Open Access28 Scopus citations -
Structure-function studies reveal ComEA contains an oligomerization domain essential for transformation in gram-positive bacteria
Ahmed, I., Hahn, J., Henrickson, A., Khaja, F. T., Demeler, B., Dubnau, D. & Neiditch, M. B., Dec 2022, In: Nature communications. 13, 1, 7724.Research output: Contribution to journal › Article › peer-review
Open Access11 Scopus citations -
2021
A cost-effective plan for global testing - An infection rate stratified, algorith guided, multiple-level, continuously pooled testing strategy
Gu, T., Yao, L., Meng, X., Graff, J. C., Thomason, D., Li, J., Dong, W., Jiao, Y., Aleya, L., Maida, M., Wang, C. Y., Zangerl, B., Genini, S., Ray, K., Goldman, E., Ji, J., Alexandrov, A. V., Sun, D., Gu, W. & Wang, Y., Apr 15 2021, In: Science of the Total Environment. 765, 144251.Research output: Contribution to journal › Article › peer-review
Open Access8 Scopus citations -
Analysis of 1,25-dihydroxyvitamin D3 genomic action reveals calcium-regulating and calcium-independent effects in mouse intestine and human enteroids
Li, S., de la Cruz, J., Hutchens, S., Mukhopadhyay, S., Criss, Z. K., Aita, R., Pellon-Cardenas, O., Hur, J., Soteropoulos, P., Husain, S., Dhawan, P., Verlinden, L., Carmeliet, G., Fleet, J. C., Shroyer, N. F., Verzi, M. P. & Christakos, S., 2021, In: Molecular and cellular biology. 41, 1, e00372-20.Research output: Contribution to journal › Article › peer-review
Open Access23 Scopus citations -
Anti-N-homocysteine-protein autoantibodies are associated with impaired cognition
Włoczkowska, O., Perła-Kaján, J., Smith, A. D., de Jager, C., Refsum, H. & Jakubowski, H., 2021, In: Alzheimer's and Dementia: Translational Research and Clinical Interventions. 7, 1, e12159.Research output: Contribution to journal › Article › peer-review
Open Access7 Scopus citations -
B Vitamins Prevent Iron-Associated Brain Atrophy and Domain-Specific Effects of Iron, Copper, Aluminum, and Silicon on Cognition in Mild Cognitive Impairment
Jakubowski, H., Zioła-Frankowska, A., Frankowski, M., Perła-Kaján, J., Refsum, H., De Jager, C. A. & Smith, A. D., 2021, In: Journal of Alzheimer's Disease. 84, 3, p. 1039-1055 17 p.Research output: Contribution to journal › Article › peer-review
Open Access15 Scopus citations -
Changes in redox plasma proteome of Pon1−/− mice are exacerbated by a hyperhomocysteinemic diet
Sikora, M. & Jakubowski, H., Jun 2021, In: Free Radical Biology and Medicine. 169, p. 169-180 12 p.Research output: Contribution to journal › Article › peer-review
6 Scopus citations -
COVID-19 vaccine: Call for employees in international transportation industries and international travelers as the first priority in global distribution
Yu, Z., Wang, G., Goldman, E., Zangerl, B., Xie, N., Cao, Y., Chen, J., Day, S. W., Howard, S. C., Maida, M., Ray, K., Jablonski, M. M., Ji, J., Postlethwaite, A., Gu, W., Sun, D. & Aleya, L., Jan 1 2021, In: Open Medicine (Poland). 16, 1, p. 134-138 5 p.Research output: Contribution to journal › Article › peer-review
Open Access4 Scopus citations -
Discovery of Imidazole-Based Inhibitors of Plasmodium falciparum cGMP-Dependent Protein Kinase
Bheemanaboina, R. R. Y., De Souza, M. L., Gonzalez, M. L., Mahmood, S. U., Eck, T., Kreiss, T., Aylor, S. O., Roth, A., Lee, P., Pybus, B. S., Colussi, D. J., Childers, W. E., Gordon, J., Siekierka, J. J., Bhanot, P. & Rotella, D. P., Dec 9 2021, In: ACS Medicinal Chemistry Letters. 12, 12, p. 1962-1967 6 p.Research output: Contribution to journal › Article › peer-review
Open Access3 Scopus citations -
Higher Concentrations of Bacterial Enveloped Virus Phi6 Can Protect the Virus from Environmental Decay
Bangiyev, R., Chudaev, M., Schaffner, D. W. & Goldman, E., Nov 2021, In: Applied and environmental microbiology. 87, 21, e01371-21.Research output: Contribution to journal › Article › peer-review
Open Access17 Scopus citations -
Identification of a new transcriptional co-regulator of steap1 in ewing’s sarcoma
Markey, F. B., Romero, B., Parashar, V. & Batish, M., Jun 2021, In: Cells. 10, 6, 1300.Research output: Contribution to journal › Article › peer-review
Open Access6 Scopus citations -
Mesenchymal Stem Cell-Secreted Extracellular Vesicles Instruct Stepwise Dedifferentiation of Breast Cancer Cells into Dormancy at the Bone Marrow Perivascular Region
Sandiford, O. A., Donnelly, R. J., El-Far, M. H., Burgmeyer, L. M., Sinha, G., Pamarthi, S. H., Sherman, L. S., Ferrer, A. I., Devore, D. E., Patel, S. A., Naaldijk, Y., Alonso, S., Barak, P., Bryan, M., Ponzio, N. M., Narayanan, R., Etchegaray, J. P., Kumar, R. & Rameshwar, P., Mar 2021, In: Cancer Research. 81, 6, p. 1567-1582 16 p.Research output: Contribution to journal › Article › peer-review
Open Access82 Scopus citations -
Paraoxonase 1, B Vitamins Supplementation, and Mild Cognitive Impairment
Perła-Kaján, J., Włoczkowska, O., Zioła-Frankowska, A., Frankowski, M., Smith, A. D., De Jager, C. A., Refsum, H. & Jakubowski, H., 2021, In: Journal of Alzheimer's Disease. 81, 3, p. 1211-1229 19 p.Research output: Contribution to journal › Article › peer-review
Open Access21 Scopus citations -
Pathogenesis of Borrelia burgdorferi and Babesia microti in TLR4-Competent and TLR4-dysfunctional C3H mice
Akoolo, L., Djokic, V., Rocha, S. C. & Parveen, N., Sep 2021, In: Cellular Microbiology. 23, 9, e13350.Research output: Contribution to journal › Article › peer-review
Open Access9 Scopus citations -
Proteome-Wide Analysis of Protein Lysine N-Homocysteinylation in Saccharomyces cerevisiae
Perla-Kaján, J., Malinowska, A., Zimny, J., Cysewski, D., Suszyńska-Zajczyk, J. & Jakubowski, H., May 7 2021, In: Journal of Proteome Research. 20, 5, p. 2458-2476 19 p.Research output: Contribution to journal › Article › peer-review
3 Scopus citations