School of Health Professions, Biomedical Informatics

Research Output

2020

Test–Retest Reliability of Functional Magnetic Resonance Imaging Activation for a Vergence Eye Movement Task

Morales, C., Gohel, S., Li, X., Scheiman, M., Biswal, B. B., Santos, E. M., Yaramothu, C. & Alvarez, T. L., May 1 2020, In : Neuroscience Bulletin. 36, 5, p. 506-518 13 p.

Research output: Contribution to journalArticle

The Convergence Insufficiency Neuro-mechanism in Adult Population Study (CINAPS) Randomized Clinical Trial: Design, Methods, and Clinical Data

Alvarez, T. L., Scheiman, M., Santos, E. M., Morales, C., Yaramothu, C., D’Antonio-Bertagnolli, J. V., Biswal, B. B., Gohel, S. & Li, X., Jan 2 2020, In : Ophthalmic Epidemiology. 27, 1, p. 52-72 21 p.

Research output: Contribution to journalArticle

Validation of new method for predicting human skin temperatures during cold exposure: The Cold Weather Ensemble Decision Aid (CoWEDA)

Potter, A. W., Looney, D. P., Santee, W. R., Gonzalez, J. A., Welles, A. P., Srinivasan, S., Castellani, M. P., Rioux, T. P., Hansen, E. O. & Xu, X., 2020, In : Informatics in Medicine Unlocked. 18, 100301.

Research output: Contribution to journalArticle

Open Access
2019
Open Access
3 Scopus citations

Clinical and Functional Imaging Changes Induced from Vision Therapy in Patients with Convergence Insufficiency

Alvarez, T. L., Scheiman, M., Santos, E. M., Morales, C., Yaramothu, C., D'Antonio-Bertagnolli, J. V., Gohel, S., Biswal, B. B. & Li, X., Jul 2019, 2019 41st Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2019. Institute of Electrical and Electronics Engineers Inc., p. 104-109 6 p. 8857163. (Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Early childhood network alterations in severe autism

Kaku, S. M., Jayashankar, A., Girimaji, S. C., Bansal, S., Gohel, S., Bharath, R. D. & Srinath, S., Jan 1 2019, In : Asian Journal of Psychiatry. 39, p. 114-119 6 p.

Research output: Contribution to journalArticle

Heat Strain Decision Aid (HSDA) accurately predicts individual-based core body temperature rise while wearing chemical protective clothing

Potter, A. W., Hunt, A. P., Cadarette, B. S., Fogarty, A., Srinivasan, S., Santee, W. R., Blanchard, L. A. & Looney, D. P., Apr 2019, In : Computers in Biology and Medicine. 107, p. 131-136 6 p.

Research output: Contribution to journalArticle

Open Access
Open Access
1 Scopus citations

Physician Review of a Celiac Disease Risk Estimation and Decision-Making Expert System

Pastore, R. L., Murray, J. A., Coffman, F. D., Mitrofanova, A. & Srinivasan, S., Nov 17 2019, In : Journal of the American College of Nutrition. 38, 8, p. 722-728 7 p.

Research output: Contribution to journalArticle

Open Access
1 Scopus citations

Resting-state functional connectivity of the middle frontal gyrus can predict language lateralization in patients with brain tumors

Gohel, S., Laino, M. E., Rajeev-Kumar, G., Jenabi, M., Peck, K., Hatzoglou, V., Tabar, V., Holodny, A. I. & Vachha, B., Feb 1 2019, In : American Journal of Neuroradiology. 40, 2, p. 319-325 7 p.

Research output: Contribution to journalArticle

2 Scopus citations

Targeted RNA-sequencing for the quantification of measurable residual disease in acute myeloid leukemia

Dillon, L. W., Hayati, S., Roloff, G. W., Tunc, I., Pirooznia, M., Mitrofanova, A. & Hourigan, C. S., Jan 31 2019, In : Haematologica. 104, 2, p. 297-304 8 p.

Research output: Contribution to journalArticle

9 Scopus citations
2018

Age and HIV effects on resting state of the brain in relationship to neurocognitive functioning

Egbert, A. R., Biswal, B., Karunakaran, K., Gohel, S., Pluta, A., Wolak, T., Szymańska, B., Firląg-Burkacka, E., Sobańska, M., Gawron, N., Bieńkowski, P., Sienkiewicz-Jarosz, H., Ścińska-Bieńkowska, A., Bornstein, R., Rao, S. & Łojek, E., May 15 2018, In : Behavioural Brain Research. 344, p. 20-27 8 p.

Research output: Contribution to journalArticle

7 Scopus citations

Cooperation of loss of NKX3.1 and inflammation in prostate cancer initiation

Le Magnen, C., Virk, R. K., Dutta, A., Kim, J. Y., Panja, S., Lopez-Bujanda, Z. A., Califano, A., Drake, C. G., Mitrofanova, A. & Abate-Shen, C., Nov 2018, In : DMM Disease Models and Mechanisms. 11, 11

Research output: Contribution to journalArticle

3 Scopus citations

Differential associations of combined vs. isolated cannabis and nicotine on brain resting state networks

Filbey, F. M., Gohel, S., Prashad, S. & Biswal, B. B., Sep 1 2018, In : Brain Structure and Function. 223, 7, p. 3317-3326 10 p.

Research output: Contribution to journalArticle

8 Scopus citations

Differential requirements of androgen receptor in luminal progenitors during prostate regeneration and tumor initiation

Chua, C. W., Epsi, N. J., Leung, E. Y., Xuan, S., Lei, M., Li, B. I., Bergren, S. K., Hibshoosh, H., Mitrofanova, A. & Shen, M. M., Jan 15 2018, In : eLife. 7, e28768.

Research output: Contribution to journalArticle

7 Scopus citations

Differential requirements of androgen receptor in luminal progenitors during prostate regeneration and tumor initiation

Chua, C. W., Epsi, N. J., Leung, E. Y., Xuan, S., Lei, M., Li, B. I., Bergren, S. K., Hibshoosh, H., Mitrofanova, A. & Shen, M. M., Jan 15 2018, In : eLife. 7, e28768.

Research output: Contribution to journalArticle

Frequency specific resting state functional abnormalities in psychosis

Gohel, S., Gallego, J. A., Robinson, D. G., DeRosse, P., Biswal, B. & Szeszko, P. R., Nov 2018, In : Human Brain Mapping. 39, 11, p. 4509-4518 10 p.

Research output: Contribution to journalArticle

5 Scopus citations

Functional connectivity alterations between networks and associations with infant immune health within networks in HIV infected children on early treatment: A study at 7 years

Toich, J. T. F., Taylor, P. A., Holmes, M. J., Gohel, S., Cotton, M. F., Dobbels, E., Laughton, B., Little, F., Van Der Kouwe, A. J. W., Biswal, B. & Meintjes, E. M., Jan 11 2018, In : Frontiers in Human Neuroscience. 11, 635.

Research output: Contribution to journalArticle

1 Scopus citations

Integrative (epi) Genomic Analysis to Predict Response to Androgen-Deprivation Therapy in Prostate Cancer

Panja, S., Hayati, S., Epsi, N. J., Parrott, J. S. & Mitrofanova, A., May 2018, In : EBioMedicine. 31, p. 110-121 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

NSD2 is a conserved driver of metastatic prostate cancer progression

Aytes, A., Giacobbe, A., Mitrofanova, A., Ruggero, K., Cyrta, J., Arriaga, J., Palomero, L., Farran-Matas, S., Rubin, M. A., Shen, M. M., Califano, A. & Abate-Shen, C., Dec 1 2018, In : Nature communications. 9, 1, 5201.

Research output: Contribution to journalArticle

5 Scopus citations
2017

A computational systems approach identifies synergistic specification genes that facilitate lineage conversion to prostate tissue

Talos, F., Mitrofanova, A., Bergren, S. K., Califano, A. & Shen, M. M., Jan 1 2017, In : Nature communications. 8, 14662.

Research output: Contribution to journalArticle

11 Scopus citations

Artificial neural network as classification method for prostate cancer incidence

Alqahtani, K. S., Srinivasan, S. & Mital, D. P., Jan 1 2017, In : International Journal of Medical Engineering and Informatics. 9, 1, p. 61-72 12 p.

Research output: Contribution to journalArticle

2 Scopus citations

A single session of rTMS enhances small-worldness in writer’s cramp: Evidence from simultaneous EEG-fMRI multi-modal brain graph

Bharath, R. D., Panda, R., Reddam, V. R., Bhaskar, M. V., Gohel, S., Bhardwaj, S., Prajapati, A. & Pal, P. K., Sep 5 2017, In : Frontiers in Human Neuroscience. 11, 443.

Research output: Contribution to journalArticle

3 Scopus citations

Co-clinical Analysis of a Genetically Engineered Mouse Model and Human Prostate Cancer Reveals Significance of NKX3.1 Expression for Response to 5α-reductase Inhibition

Dutta, A., Panja, S., Virk, R. K., Kim, J. Y., Zott, R., Cremers, S., Golombos, D. M., Liu, D., Mosquera, J. M., Mostaghel, E. A., Barbieri, C. E., Mitrofanova, A. & Abate-Shen, C., Oct 1 2017, In : European Urology. 72, 4, p. 499-506 8 p.

Research output: Contribution to journalArticle

5 Scopus citations

Do all roads lead to Rome? A comparison of brain networks derived from inter-subject volumetric and metabolic covariance and moment-to-moment hemodynamic correlations in old individuals

The Alzheimer’s Disease Neuroimaging Initiative, Nov 1 2017, In : Brain Structure and Function. 222, 8, p. 3833-3845 13 p.

Research output: Contribution to journalArticle

15 Scopus citations

Localized reductions in resting-state functional connectivity in children with prenatal alcohol exposure

Fan, J., Taylor, P. A., Jacobson, S. W., Molteno, C. D., Gohel, S., Biswal, B. B., Jacobson, J. L. & Meintjes, E. M., Oct 2017, In : Human Brain Mapping. 38, 10, p. 5217-5233 17 p.

Research output: Contribution to journalArticle

9 Scopus citations

Penalised Cox regression models for survival data

Zhou, D., Mital, D. P., Srinivasan, S. & Shibata, M., Jan 1 2017, In : International Journal of Medical Engineering and Informatics. 9, 1, p. 1-19 19 p.

Research output: Contribution to journalArticle

1 Scopus citations

Transdifferentiation as a mechanism of treatment resistance in a mouse model of castration-resistant prostate cancer

Zou, M., Toivanen, R., Mitrofanova, A., Floch, N., Hayati, S., Sun, Y., Le Magnen, C., Chester, D., Mostaghel, E. A., Califano, A., Rubin, M. A., Shen, M. M. & Abate-Shen, C., Jul 2017, In : Cancer Discovery. 7, 7, p. 736-749 14 p.

Research output: Contribution to journalArticle

101 Scopus citations
2016

Clinical decision support system for management of root canal treated teeth

Shah, A., Dipede, L., Srinivasan, S. & Mital, D. P., Jan 1 2016, In : International Journal of Medical Engineering and Informatics. 8, 3, p. 225-238 14 p.

Research output: Contribution to journalArticle

1 Scopus citations

Drinkers' memory bias for alcohol picture cues in explicit and implicit memory tasks

Nguyen-Louie, T. T., Buckman, J. F., Ray, S. & Bates, M. E., Mar 1 2016, In : Drug and Alcohol Dependence. 160, p. 90-96 7 p.

Research output: Contribution to journalArticle

4 Scopus citations

Effective connectivity within the mesocorticolimbic system during resting-state in cocaine users

Ray, S., Di, X. & Biswal, B. B., Nov 9 2016, In : Frontiers in Human Neuroscience. 10, NOV2016, 563.

Research output: Contribution to journalArticle

5 Scopus citations

Functional topography of the thalamocortical system in human

Yuan, R., Di, X., Taylor, P. A., Gohel, S., Tsai, Y. H. & Biswal, B. B., May 1 2016, In : Brain Structure and Function. 221, 4, p. 1971-1984 14 p.

Research output: Contribution to journalArticle

43 Scopus citations

Identification of an NKX3.1-G9a-UTY transcriptional regulatory network that controls prostate differentiation

Dutta, A., Le Magnen, C., Mitrofanova, A., Ouyang, X., Califano, A. & Abate-Shen, C., Jun 24 2016, In : Science. 352, 6293, p. 1576-1580 5 p.

Research output: Contribution to journalArticle

36 Scopus citations

Photosensitizer (PS)-cyanine dye (CD) conjugates: Impact of the linkers joining the PS and CD moieties and their orientation in tumor-uptake and photodynamic therapy (PDT)

James, N. S., Joshi, P., Ohulchanskyy, T. Y., Chen, Y., Tabaczynski, W., Durrani, F., Shibata, M. & Pandey, R. K., Jan 1 2016, In : European Journal of Medicinal Chemistry. 122, p. 770-785 16 p.

Research output: Contribution to journalArticle

13 Scopus citations

Reduced small world brain connectivity in probands with a family history of epilepsy

Bharath, R. D., Chaitanya, G., Panda, R., Raghavendra, K., Sinha, S., Sahoo, A., Gohel, S., Biswal, B. B. & Satishchandra, P., Dec 1 2016, In : European Journal of Neurology. 23, 12, p. 1729-1737 9 p.

Research output: Contribution to journalArticle

7 Scopus citations
6 Scopus citations
2015

Altered functional connectivity strength in abstinent chronic cocaine smokers compared to healthy controls

Ray, S., Gohel, S. & Biswal, B. B., Oct 1 2015, In : Brain Connectivity. 5, 8, p. 476-486 11 p.

Research output: Contribution to journalArticle

13 Scopus citations

Analysis of incidence of lung cancer in various states of the USA

Vyas, R., Haque, S., Mital, D. P. & Srinivasan, S., Jan 1 2015, In : International Journal of Medical Engineering and Informatics. 7, 1, p. 36-45 10 p.

Research output: Contribution to journalArticle

1 Scopus citations

Analysis of risk factors for prostate cancer patients

Alqahtani, K. S., Srinivasan, S., Mital, D. P. & Haque, S., Jan 1 2015, In : International Journal of Medical Engineering and Informatics. 7, 4, p. 365-380 16 p.

Research output: Contribution to journalArticle

1 Scopus citations
1 Scopus citations

Functional integration between brain regions at rest occurs in multiple-frequency bands

Gohel, S. & Biswal, B. B., Feb 1 2015, In : Brain Connectivity. 5, 1, p. 23-34 12 p.

Research output: Contribution to journalArticle

76 Scopus citations

Modeling Causal Relationship between Brain Regions Within the Drug-Cue Processing Network in Chronic Cocaine Smokers

Ray, S., Haney, M., Hanson, C., Biswal, B. & Hanson, S. J., Dec 1 2015, In : Neuropsychopharmacology. 40, 13, p. 2960-2968 9 p.

Research output: Contribution to journalArticle

14 Scopus citations

Predicting Drug Response in Human Prostate Cancer from Preclinical Analysis of In Vivo Mouse Models

Mitrofanova, A., Aytes, A., Zou, M., Shen, M. M., Abate-Shen, C. & Califano, A., Sep 29 2015, In : Cell Reports. 12, 12, p. 2060-2071 12 p.

Research output: Contribution to journalArticle

14 Scopus citations

Recovery of resting brain connectivity ensuing mild traumatic brain injury

Bharath, R. D., Munivenkatappa, A., Gohel, S., Panda, R., Saini, J., Rajeswaran, J., Shukla, D., Bhagavatula, I. D. & Biswal, B. B., Sep 22 2015, In : Frontiers in Human Neuroscience. 9, September, 513.

Research output: Contribution to journalArticle

32 Scopus citations

Repetitive transcranial magnetic stimulation induced modulations of resting state motor connectivity in writer's cramp

Bharath, R. D., Biswal, B. B., Bhaskar, M. V., Gohel, S., Jhunjhunwala, K., Panda, R., George, L., Gupta, A. K. & Pal, P. K., May 1 2015, In : European Journal of Neurology. 22, 5, p. 796-e54

Research output: Contribution to journalArticle

17 Scopus citations

S-nitrosylation in organs of mice exposed to low or high doses of γ-rays: The modulating effect of iodine contrast agent at a low radiation dose

Nicolas, F., Wu, C., Bukhari, S., de Toledo, S. M., Li, H., Shibata, M. & Azzam, E. I., Jun 1 2015, In : Proteomes. 3, 2, p. 56-73 18 p.

Research output: Contribution to journalArticle

4 Scopus citations