• 28710 Citations
  • 48 h-Index
1985 …2021

Research output per year

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Research Output

2010

Virtual screening with AutoDock: Theory and practice

Cosconati, S., Forli, S., Perryman, A. L., Harris, R., Goodsell, D. S. & Olson, A. J., Jun 1 2010, In : Expert Opinion on Drug Discovery. 5, 6, p. 597-607 11 p.

Research output: Contribution to journalReview article

253 Scopus citations

Visualization of macromolecular structures

O’Donoghue, S. I., Goodsell, D. S., Frangakis, A. S., Jossinet, F., Laskowski, R. A., Nilges, M., Saibil, H. R., Schafferhans, A., Wade, R. C., Westhof, E. & Olson, A. J., Mar 2010, In : Nature Methods. 7, 3, 1 p.

Research output: Contribution to journalReview article

95 Scopus citations

Visualizing biological data—now and in the future

O’Donoghue, S. I., Gavin, A. C., Gehlenborg, N., Goodsell, D. S., Hériché, J. K., Nielsen, C. B., North, C., Olson, A. J., Procter, J. B., Shattuck, D. W., Walter, T. & Wong, B., Mar 2010, In : Nature Methods. 7, 3, p. S2-S4

Research output: Contribution to journalComment/debate

74 Scopus citations
2009

Computational docking of biomolecular complexes with autodock

Goodsell, D., Aug 13 2009, In : Cold Spring Harbor Protocols. 4, 5

Research output: Contribution to journalArticle

19 Scopus citations

Escherichia coli

Goodsell, D. S., Nov 1 2009, In : Biochemistry and Molecular Biology Education. 37, 6, p. 325-332 8 p.

Research output: Contribution to journalArticle

17 Scopus citations

Fact and fantasy in nanotech imagery

Goodsell, D., Jan 1 2009, In : Leonardo. 42, 1, p. 52-57 6 p.

Research output: Contribution to journalArticle

12 Scopus citations

Neuromuscular synapse

Goodsell, D. S., Jul 1 2009, In : Biochemistry and Molecular Biology Education. 37, 4, p. 204-210 7 p.

Research output: Contribution to journalArticle

6 Scopus citations

Software news and updates AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility

Morris, G. M., Ruth, H., Lindstrom, W., Sanner, M. F., Belew, R. K., Goodsell, D. S. & Olson, A. J., Dec 1 2009, In : Journal of Computational Chemistry. 30, 16, p. 2785-2791 7 p.

Research output: Contribution to journalArticle

7434 Scopus citations
2008

Automated prediction of ligand-binding sites in proteins

Harris, R., Olson, A. J. & Goodsell, D. S., Mar 1 2008, In : Proteins: Structure, Function and Genetics. 70, 4, p. 1506-1517 12 p.

Research output: Contribution to journalArticle

70 Scopus citations

Empirical entropie contributions in computational docking: Evaluation in APS reductase complexes

Chang, M. W., Belew, R. K., Carroll, K. S., Olson, A. J. & Goodsell, D. S., Aug 1 2008, In : Journal of Computational Chemistry. 29, 11, p. 1753-1761 9 p.

Research output: Contribution to journalArticle

31 Scopus citations

Protein-Ligand Docking

Morris, G. M., Olson, A. J. & Goodsell, D. S., Mar 4 2008, Evolutionary Algorithms in Molecular Design. wiley, Vol. 8. p. 31-48 18 p.

Research output: Chapter in Book/Report/Conference proceedingChapter

5 Scopus citations

Structure-based virtual screening and biological evaluation of Mycobacterium tuberculosis adenosine 5′-phosphosulfate reductase inhibitors

Cosconati, S., Hong, J. A., Novellino, E., Carroll, K. S., Goodsell, D. & Olson, A. J., Nov 13 2008, In : Journal of Medicinal Chemistry. 51, 21, p. 6627-6630 4 p.

Research output: Contribution to journalArticle

33 Scopus citations
2007

Filling in the gaps: Artistic license in education and outreach

Goodsell, D. S. & Johnson, G. T., Dec 1 2007, In : PLoS biology. 5, 12, p. 2759-2762 4 p.

Research output: Contribution to journalReview article

27 Scopus citations

Making the step from chemistry to biology and back

Goodsell, D. S., Nov 2007, In : Nature Chemical Biology. 3, 11, p. 681-684 4 p.

Research output: Contribution to journalComment/debate

3 Scopus citations

Software news and update a semiempirical free energy force field with charge-based desolvation

Huey, R., Morris, G. M., Olson, A. J. & Goodsell, D. S., Apr 30 2007, In : Journal of Computational Chemistry. 28, 6, p. 1145-1152 8 p.

Research output: Contribution to journalArticle

1425 Scopus citations

The molecular perspective: Hepatitis B virus

Goodsell, D. S., Nov 1 2007, In : Oncologist. 12, 5, p. 516-517 2 p.

Research output: Contribution to journalShort survey

2 Scopus citations
2006

Recognition highlights: Toll-like receptors

Goodsell, D. S., Sep 1 2006, In : Journal of Molecular Recognition. 19, 5, p. 387-388 2 p.

Research output: Contribution to journalArticle

Seeing the nanoscale

Goodsell, D. S., Aug 1 2006, In : Nano Today. 1, 3, p. 44-49 6 p.

Research output: Contribution to journalArticle

11 Scopus citations

Tactile teaching: Exploring protein structure/function using physical models

Herman, T., Morris, J., Colton, S., Batiza, A., Patrick, M., Franzen, M. & Goodsell, D. S., Jul 1 2006, In : Biochemistry and Molecular Biology Education. 34, 4, p. 247-254 8 p.

Research output: Contribution to journalReview article

39 Scopus citations

The molecular perspective: Alcohol

Goodsell, D. S., Oct 1 2006, In : Oncologist. 11, 9, p. 1045-1046 2 p.

Research output: Contribution to journalArticle

6 Scopus citations

The molecular perspective: Tumor necrosis factor

Goodsell, D. S., Jan 1 2006, In : Oncologist. 11, 1, p. 83-84 2 p.

Research output: Contribution to journalShort survey

10 Scopus citations

The molecular perspective: c-Abl tyrosine kinase

Goodsell, D. S., Jan 1 2006, In : STEM CELLS. 24, 1, p. 209-210 2 p.

Research output: Contribution to journalShort survey

2 Scopus citations

The molecular perspective: Estrogen sulfotransferase

Goodsell, D. S., Apr 1 2006, In : Oncologist. 11, 4, p. 418-419 2 p.

Research output: Contribution to journalShort survey

3 Scopus citations

The molecular perspective: Tissue factor

Goodsell, D. S., Aug 7 2006, In : Oncologist. 11, 7, p. 849-850 2 p.

Research output: Contribution to journalShort survey

5 Scopus citations

The molecular perspective: Cisplatin.

Goodsell, D., Mar 1 2006, In : Stem cells (Dayton, Ohio). 24, 3, p. 514-515 2 p.

Research output: Contribution to journalArticle

The molecular perspective: Cisplatin

Goodsell, D. S., Mar 1 2006, In : Oncologist. 11, 3, p. 316-317 2 p.

Research output: Contribution to journalShort survey

14 Scopus citations

The molecular perspective: Cisplatin

Goodsell, D. S., Mar 2006, In : STEM CELLS. 24, 3, p. 514-515 2 p.

Research output: Contribution to journalShort survey

7 Scopus citations
2005

1,2,3-Triazole as a peptide surrogate in the rapid synthesis of HIV-1 protease inhibitors

Brik, A., Alexandratos, J., Lin, Y. C., Elder, J. H., Olson, A. J., Wlodawer, A., Goodsell, D. S. & Wong, C. H., Jul 1 2005, In : ChemBioChem. 6, 7, p. 1167-1169 3 p.

Research output: Contribution to journalArticle

236 Scopus citations
3 Scopus citations

Identifying protein binding sites and optimal ligands

Beuscher, A., Olson, A. J. & Goodsell, D., Sep 1 2005, In : Letters in Drug Design and Discovery. 2, 6, p. 483-489 7 p.

Research output: Contribution to journalArticle

4 Scopus citations

Recognition in action: DNA mimicry

Goodsell, D., Nov 1 2005, In : Journal of Molecular Recognition. 18, 6, p. 427-430 4 p.

Research output: Contribution to journalReview article

3 Scopus citations

Recognition in action: Flipping pyrimidine dimers

Goodsell, D., May 1 2005, In : Journal of Molecular Recognition. 18, 3, p. 193-195 3 p.

Research output: Contribution to journalArticle

1 Scopus citations
14 Scopus citations

The cAMP binding domain: An ancient signaling module

Berman, H. M., Ten Eyck, L. F., Goodsell, D. S., Haste, N. M., Kornev, A. & Taylor, S. S., Jan 4 2005, In : Proceedings of the National Academy of Sciences of the United States of America. 102, 1, p. 45-50 6 p.

Research output: Contribution to journalArticle

142 Scopus citations

The molecular perspective: RAD51 and BRCA2

Goodsell, D. S., Aug 1 2005, In : Oncologist. 10, 7, p. 555-556 2 p.

Research output: Contribution to journalShort survey

The molecular perspective: Major histocompatibility complex

Goodsell, D. S., Jan 1 2005, In : Oncologist. 10, 1, p. 80-81 2 p.

Research output: Contribution to journalShort survey

3 Scopus citations

The molecular perspective: L-asparaginase

Goodsell, D. S., Mar 1 2005, In : Oncologist. 10, 3, p. 238-239 2 p.

Research output: Contribution to journalReview article

7 Scopus citations

The molecular perspective: Morphine

Goodsell, D. S., Jan 1 2005, In : STEM CELLS. 23, 1, p. 144-145 2 p.

Research output: Contribution to journalReview article

4 Scopus citations

The molecular perspective: L-asparaginase

Goodsell, D. S., May 1 2005, In : STEM CELLS. 23, 5, p. 710-711 2 p.

Research output: Contribution to journalShort survey

2 Scopus citations

The molecular perspective: Major histocompatibility complex

Goodsell, D. S., Mar 1 2005, In : STEM CELLS. 23, 3, p. 454-455 2 p.

Research output: Contribution to journalReview article

2 Scopus citations

The molecular perspective: Double-stranded DNA breaks

Goodsell, D. S., Aug 1 2005, In : STEM CELLS. 23, 7, p. 1021-1022 2 p.

Research output: Contribution to journalReview article

The molecular perspective: RAD51 and BRCA2

Goodsell, D. S., Oct 1 2005, In : STEM CELLS. 23, 9, p. 1434-1435 2 p.

Research output: Contribution to journalReview article

1 Scopus citations

The molecular perspective: Double-stranded DNA breaks

Goodsell, D. S., May 1 2005, In : Oncologist. 10, 5, p. 361-362 2 p.

Research output: Contribution to journalShort survey

10 Scopus citations

The molecular perspective: c-Abl tyrosine kinase

Goodsell, D. S., Oct 1 2005, In : Oncologist. 10, 9, p. 758-759 2 p.

Research output: Contribution to journalReview article

2 Scopus citations

Visual methods from atoms to cells

Goodsell, D. S., Mar 2005, In : Structure. 13, 3, p. 347-354 8 p.

Research output: Contribution to journalShort survey

39 Scopus citations
2004

Augmented reality with tangible auto-fabricated models for molecular biology applications

Gillet, A., Sanner, M., Stoffler, D., Goodsell, D. & Olson, A., Dec 1 2004, IEEE Visualization 2004 - Proceedings, VIS 2004. Rushmeier, H., Turk, G. & Wijk, J. J. (eds.). p. 235-241 7 p. (IEEE Visualization 2004 - Proceedings, VIS 2004).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

33 Scopus citations

Computer-linked autofabricated 3D models for teaching structural biology

Gillet, A., Weghorst, S., Winn, W., Stoffler, D., Sanner, M., Goodsell, D. & Olson, A., Dec 1 2004.

Research output: Contribution to conferencePaper

2 Scopus citations

The molecular perspective: Nicotine and nitrosamines

Goodsell, D. S., Jun 23 2004, In : Oncologist. 9, 3, p. 353-354 2 p.

Research output: Contribution to journalReview article

2 Scopus citations

The molecular perspective: Morphine

Goodsell, D. S., Dec 6 2004, In : Oncologist. 9, 6, p. 717-718 2 p.

Research output: Contribution to journalReview article

3 Scopus citations

The molecular perspective: Cyclins

Goodsell, D., Jan 1 2004, In : STEM CELLS. 22, 6, p. 1121-1122 2 p.

Research output: Contribution to journalReview article