Find Research Outputs

2019

A summary of the 4th international workshop on recovering 6D object pose

Hodaň, T., Kouskouridas, R., Kim, T. K., Tombari, F., Bekris, K., Drost, B., Groueix, T., Walas, K., Lepetit, V., Leonardis, A., Steger, C., Michel, F., Sahin, C., Rother, C. & Matas, J., Jan 1 2019, Computer Vision – ECCV 2018 Workshops, Proceedings. Leal-Taixé, L. & Roth, S. (eds.). Springer Verlag, p. 589-600 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 11129 LNCS).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Pose Estimation
Industry
Open Problems
Benchmark
Object
1 Citation (Scopus)

Asymmetry observables and the origin of RD (∗) anomalies

Asadi, P., Buckley, M. & Shih, D., Feb 1 2019, In : Physical Review D. 99, 3, 035015.

Research output: Contribution to journalArticle

Open Access
asymmetry
anomalies
neutrinos
physics
decay
1 Citation (Scopus)

ATM is activated by ATP depletion and modulates mitochondrial function through NRF1

Chow, H. M., Cheng, A., Song, X., Swerdel, M. R., Hart, R. & Herrup, K., Mar 1 2019, In : Journal of Cell Biology. 218, 3, p. 909-928 20 p.

Research output: Contribution to journalArticle

Purkinje Cells
Adenosine Triphosphate
Ataxia Telangiectasia
Mitochondrial Genes
Dimerization

A transcriptomic (RNA-seq) analysis of genes responsive to both cadmium and arsenic stress in rice root

Huang, Y., Chen, H., Reinfelder, J., Liang, X., Sun, C., Liu, C., Li, F. & Yi, J., May 20 2019, In : Science of the Total Environment. 666, p. 445-460 16 p.

Research output: Contribution to journalArticle

Arsenic
RNA
Cadmium
arsenic
cadmium

Attributable mortality from extensively drug-resistant gram-negative infections using propensity-matched tracer antibiotic algorithms

Kadri, S. S., Strich, J. R., Swihart, B. J., Hohmann, S., Dekker, J. P., Palmore, T., Bonne, S., Freeman, B., Raybould, J., Shah, N. G., Patel, D., Husson, J., Jacobs, M. D., Duong, L., Follmann, D., Hooper, D. C., Timpone, J. & Danner, R. L., Jan 1 2019, In : American Journal of Infection Control.

Research output: Contribution to journalArticle

Anti-Bacterial Agents
Colistin
Mortality
Infection
Lactams

A tunable non-foster t-network loaded transmission line using distributed amplifier-based reconfigurable negative group delay circuit

Zhu, M. & Wu, C-T., Jan 16 2019, 2018 Asia-Pacific Microwave Conference, APMC 2018 - Proceedings. Institute of Electrical and Electronics Engineers Inc., p. 720-722 3 p. 8617553. (Asia-Pacific Microwave Conference Proceedings, APMC; vol. 2018-November).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Delay circuits
Group delay
Electric lines
Varactors
Transconductance

A two-level planning framework for mixed reality interactive narratives with user engagement

Braunschweiler, M., Poulakos, S., Kapadia, M. & Sumner, R. W., Jan 15 2019, Proceedings - 2018 IEEE International Conference on Artificial Intelligence and Virtual Reality, AIVR 2018. Institute of Electrical and Electronics Engineers Inc., p. 100-107 8 p. 8613640. (Proceedings - 2018 IEEE International Conference on Artificial Intelligence and Virtual Reality, AIVR 2018).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Trajectories
Planning
Visibility

A Unifying Computational Framework for Teaching and Active Learning

Yang, S. C. H., Vong, W. K., Yu, Y. & Shafto, P., Jan 1 2019, (Accepted/In press) In : Topics in Cognitive Science.

Research output: Contribution to journalArticle

Problem-Based Learning
Teaching
Learning
learning
Theory of Mind

Author Correction: Pericyte-like spreading by disseminated cancer cells activates YAP and MRTF for metastatic colonization (Nature Cell Biology, (2018), 20, 8, (966-978), 10.1038/s41556-018-0138-8)

Er, E. E., Valiente, M., Ganesh, K., Zou, Y., Agrawal, S., Hu, J., Griscom, B., Rosenblum, M., Boire, A., Brogi, E., Giancotti, F. G., Camartin, M., Malladi, S. & Massagué, J., Mar 1 2019, In : Nature Cell Biology. 21, 3, 1 p.

Research output: Contribution to journalComment/debate

Pericytes
Cell Biology
Neoplasms
1 Citation (Scopus)
Budgets
Blood Platelets
Economics
Pathogens

Automated visualization of concrete bridge deck condition from GPR data

Dinh, K., Gucunski, N. & Zayed, T., Mar 1 2019, In : NDT and E International. 102, p. 120-128 9 p.

Research output: Contribution to journalArticle

ground penetrating radar
Bridge decks
Concrete bridges
radar data
Radar

Automatic measurement of air gap for proton therapy using orthogonal x-ray imaging with radiopaque wires

Ramesh, P., Song, W., Cao, H., Zhao, Y., Parikh, R., Weiner, J., Wang, X., Nie, K., Yue, N. & Zhang, Y., Jan 1 2019, In : Journal of Applied Clinical Medical Physics. 20, 1, p. 356-360 5 p.

Research output: Contribution to journalArticle

Proton Therapy
therapy
Protons
Air
X-Rays
Orthopedics
Computer-Assisted Surgery
Bone
Ultrasonics
Bone and Bones

Autophagy inhibition specifically promotes epithelial-mesenchymal transition and invasion in RAS-mutated cancer cells

Wang, Y., Xiong, H., Liu, D., Hill, C., Ertay, A., Li, J., Zou, Y., Miller, P., White, E., Downward, J., Goldin, R. D., Yuan, X. & Lu, X., Jan 1 2019, In : Autophagy.

Research output: Contribution to journalArticle

Open Access
Epithelial-Mesenchymal Transition
Autophagy
TNF Receptor-Associated Factor 6
Neoplasms
RNA Interference
1 Citation (Scopus)

Autophagy modulates lipid metabolism to maintain metabolic flexibility for Lkb1-deficient Kras-driven lung tumorigenesis

Bhatt, V., Khayati, K., Hu, Z. S., Lee, A., Kamran, W., Su, X. & Guo, Y., Feb 1 2019, In : Genes & development. 33, 3-4, p. 150-165 16 p.

Research output: Contribution to journalArticle

Autophagy
Lipid Metabolism
Carcinogenesis
Lung
Neoplasms

Auxin EvoDevo: Conservation and Diversification of Genes Regulating Auxin Biosynthesis, Transport, and Signaling

Matthes, M. S., Best, N. B., Robil, J. M., Malcomber, S., Gallavotti, A. & McSteen, P., Mar 4 2019, In : Molecular Plant. 12, 3, p. 298-320 23 p.

Research output: Contribution to journalReview article

Indoleacetic Acids
Arabidopsis
Zea mays
auxins
biosynthesis

Avelumab in patients with previously treated metastatic melanoma: Phase 1b results from the JAVELIN Solid Tumor trial

Keilholz, U., Mehnert, J., Bauer, S., Bourgeois, H., Patel, M. R., Gravenor, D., Nemunaitis, J. J., Taylor, M. H., Wyrwicz, L., Lee, K. W., Kasturi, V., Chin, K., Von Heydebreck, A. & Gulley, J. L., Jan 16 2019, In : Journal for ImmunoTherapy of Cancer. 7, 1, 12.

Research output: Contribution to journalArticle

Melanoma
Neoplasms
Therapeutics
Disease-Free Survival
Survival

Awareness, understanding, use, and impact of the UV index: A systematic review of over two decades of international research

Heckman, C., Liang, K. & Riley, M., Jun 1 2019, In : Preventive Medicine. 123, p. 71-83 13 p.

Research output: Contribution to journalReview article

Radiation
Research
Tanning
Skin
Skin Neoplasms

A “Large-N” Content Uniformity Process Analytical Technology (PAT) Method for Phenytoin Sodium Tablets

Pawar, P., Talwar, S., Reddy, D., Bandi, C. K., Wu, H., Sowrirajan, K., Friedman, R., Drazer, G., Drennen, J. K. & Muzzio, F., Jan 1 2019, In : Journal of Pharmaceutical Sciences. 108, 1, p. 494-505 12 p.

Research output: Contribution to journalArticle

Phenytoin
Tablets
Technology
Least-Squares Analysis
Sample Size
1 Citation (Scopus)

Balancing the non-linear rosmarinic acid biosynthetic pathway by modular co-culture engineering

Li, Z., Wang, X. & Zhang, H., Jul 1 2019, In : Metabolic Engineering. 54, p. 1-11 11 p.

Research output: Contribution to journalArticle

Biosynthesis
Biosynthetic Pathways
Coculture Techniques
Acids
Biological Products

BCharge: Data-Driven Real-Time Charging Scheduling for Large-Scale Electric Bus Fleets

Wang, G., Xie, X., Zhang, F., Liu, Y. & Zhang, D., Jan 4 2019, Proceedings - 39th IEEE Real-Time Systems Symposium, RTSS 2018. Institute of Electrical and Electronics Engineers Inc., p. 45-55 11 p. 8603191. (Proceedings - Real-Time Systems Symposium; vol. 2018-December).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Scheduling
Operating costs
Electricity
Energy security
Traffic congestion

B-doping and annealing on the properties of B and Ga co-doped ZnO films

Huang, J., Hu, Y., Ma, Y., Li, B., Tang, K., Shi, H., Gou, S., Zou, T., Wang, L. & Lu, Y., Jan 25 2019, In : Surface and Coatings Technology. 358, p. 223-227 5 p.

Research output: Contribution to journalArticle

Gallium
gallium
Doping (additives)
Annealing
annealing
Iraq
ethnicity
experience
Religious Identity
Ethnic Groups

Benthic fluxes from hypoxia-influenced Gulf of Mexico sediments: Impact on bottom water acidification

Berelson, W. M., McManus, J., Severmann, S. & Rollins, N., Feb 20 2019, In : Marine Chemistry. 209, p. 94-106 13 p.

Research output: Contribution to journalArticle

benthic flux
Acidification
dissolved inorganic carbon
hypoxia
bottom water

Beyond endoscopy for the relative trace formula II: Global theory

Sakellaridis, I., Mar 1 2019, In : Journal of the Institute of Mathematics of Jussieu. 18, 2, p. 347-447 101 p.

Research output: Contribution to journalArticle

Endoscopy
Trace Formula
Test function
Analogy
Torus

Bi-allelic mutations of LONP1 encoding the mitochondrial LonP1 protease cause pyruvate dehydrogenase deficiency and profound neurodegeneration with progressive cerebellar atrophy

Nimmo, G. A. M., Venkatesh, S., Pandey, A. K., Marshall, C. R., Hazrati, L. N., Blaser, S., Ahmed, S., Cameron, J., Singh, K., Ray, P. N., Suzuki, C. & Yoon, G., Jan 15 2019, In : Human Molecular Genetics. 28, 2, p. 290-306 17 p.

Research output: Contribution to journalArticle

Pyruvate Dehydrogenase Complex Deficiency Disease
Atrophy
Pyruvic Acid
Peptide Hydrolases
Fibroblasts

Bibliometric analysis of electronic cigarette publications: 2003–2018

Briganti, M., Delnevo, C., Brown, L., Hastings, S. E. & Steinberg, M., Feb 1 2019, In : International Journal of Environmental Research and Public Health. 16, 3, 320.

Research output: Contribution to journalArticle

Bibliometrics
Publications
Tobacco Products
Tobacco
Research

Binary collision of a burning droplet and a non-burning droplet of xylene: Outcome regimes and flame dynamics

Xiong, G., Gandhi, R., Zhong, X., Mädler, L. & Tse, S., Jan 1 2019, In : Proceedings of the Combustion Institute. 37, 3, p. 3345-3352 8 p.

Research output: Contribution to journalArticle

Xylenes
xylene
Xylene
flames
collisions

Binge-like eating is not influenced by the murine model of OPRM1 A118G polymorphism

Sachdeo, B. L. Y., Yu, L., Giunta, G. M. & Bello, N., Feb 11 2019, In : Frontiers in Psychology. 10, FEB, 246.

Research output: Contribution to journalArticle

Open Access
Bulimia
sibutramine
Genotype
Feeding Behavior
Exons
1 Citation (Scopus)

Bioactive Phospholipids Enhance Migration and Adhesion of Human Leukemic Cells by Inhibiting Heme Oxygenase 1 (HO-1) and Inducible Nitric Oxygenase Synthase (iNOS) in a p38 MAPK-Dependent Manner

Abdelbaset-Ismail, A., Cymer, M., Borkowska-Rzeszotek, S., Brzeźniakiewicz-Janus, K., Rameshwar, P., Kakar, S. S., Ratajczak, J. & Ratajczak, M. Z., Feb 15 2019, In : Stem Cell Reviews and Reports. 15, 1, p. 139-154 16 p.

Research output: Contribution to journalReview article

Oxygenases
Heme Oxygenase-1
p38 Mitogen-Activated Protein Kinases
Phospholipids
Lysophosphatidylcholines

Bio- and mineral acid leaching of rare earth elements from synthetic phosphogypsum

Antonick, P. J., Hu, Z., Fujita, Y., Reed, D. W., Das, G., Wu, L., Shivaramaiah, R., Kim, P., Eslamimanesh, A., Lencka, M. M., Jiao, Y., Anderko, A., Navrotsky, A. & Riman, R., Jan 1 2019, (Accepted/In press) In : Journal of Chemical Thermodynamics. 132, p. 491-496 6 p.

Research output: Contribution to journalArticle

Organic acids
leaching
Rare earth elements
Leaching
Minerals

Biojava 5: A community driven open-source bioinformatics library

Lafita, A., Bliven, S., Prlić, A., Guzenko, D., Rose, P. W., Bradley, A., Pavan, P., Myers-Turnbull, D., Valasatava, Y., Heuer, M., Larson, M., Burley, S. & Duarte, J. M., Feb 1 2019, In : PLoS computational biology. 15, 2, e1006791.

Research output: Contribution to journalArticle

Open Access
bioinformatics
Bioinformatics
Computational Biology
Open Source
Libraries
1 Citation (Scopus)

Biological mechanisms for observational learning

Carcea, I. & Froemke, R. C., Feb 1 2019, In : Current Opinion in Neurobiology. 54, p. 178-185 8 p.

Research output: Contribution to journalReview article

Learning
Operant Conditioning
Learning Disorders
Primates
Birds
Hyaluronic Acid
Collagen
Scaffolds
Mechanics
Stiffness

Biomechanics of the golf swing using OpenSim

Mahadas, S., Mahadas, K. & Shoane, G., Feb 1 2019, In : Computers in Biology and Medicine. 105, p. 39-45 7 p.

Research output: Contribution to journalArticle

Golf
Biomechanics
Biomechanical Phenomena
Sports
MATLAB
1 Citation (Scopus)

Biosensor-assisted high performing cell selection using an E. coli toxin/antitoxin system

Wang, X., Cabales, A., Li, Z. & Zhang, H., Apr 15 2019, In : Biochemical Engineering Journal. p. 110-118 9 p.

Research output: Contribution to journalArticle

Antitoxins
Biosensing Techniques
Biosensors
Escherichia coli
Genes

Biosynthesis of the RiPP trojan horse nucleotide antibiotic microcin C is directed by the N-formyl of the peptide precursor

Dong, S. H., Kulikovsky, A., Zukher, I., Estrada, P., Dubiley, S., Severinov, K. & Nair, S. K., Jan 1 2019, In : Chemical Science. 10, 8, p. 2391-2395 5 p.

Research output: Contribution to journalArticle

Open Access
Biosynthesis
Nucleotides
Anti-Bacterial Agents
Peptides
Ubiquitin-Activating Enzymes
4 Citations (Scopus)

Black and latinx adolescents' developing beliefs about poverty and associations with their awareness of Racism

Seider, S., Clark, S., Graves, D., Kelly, L., Soutter, M., El-Amin, A. & Jennett, P., Mar 1 2019, In : Developmental psychology. 55, 3, p. 509-524 16 p.

Research output: Contribution to journalArticle

Racism
Poverty
racism
poverty
adolescent

Bleeding and Thromboembolism After TBI in the Elderly: A Real Conundrum

Glass, N., Vadlamani, A., Hwang, F., Sifri, Z. C., Kunac, A., Bonne, S., Pentakota, S. R., Yonclas, P., Mosenthal, A., Livingston, D. & Albrecht, J. S., Mar 1 2019, In : Journal of Surgical Research. 235, p. 615-620 6 p.

Research output: Contribution to journalArticle

Thromboembolism
Hemorrhage
Confidence Intervals
Incidence
Traumatic Brain Injury

Blockade of RAF and autophagy is the one-two punch to take out Ras

White, E., Jan 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 10, p. 3965-3967 3 p.

Research output: Contribution to journalComment/debate

Blueberry IPM: Past successes and future challenges

Rodriguez-Saona, C., Vincent, C. & Isaacs, R., Jan 7 2019, In : Annual Review of Entomology. 64, p. 95-114 20 p.

Research output: Contribution to journalReview article

integrated pest management
blueberries
insecticide
insecticides
insect

Body concerns and BMI as predictors of disordered eating and body mass in girls: An 18-year longitudinal investigation

Lowe, M. R., Marmorstein, N., Iacono, W., Rosenbaum, D., Espel-Huynh, H., Muratore, A. F., Lantz, E. L. & Zhang, F., Jan 1 2019, In : Journal of Abnormal Psychology. 128, 1, p. 32-43 12 p.

Research output: Contribution to journalArticle

Feeding Behavior
Eating
Body Weight
Bulimia
Growth
1 Citation (Scopus)
Nicotinic Receptors
Molecular Dynamics Simulation
Molecular dynamics
Cholesterol
Lipids
1 Citation (Scopus)

Brauer correspondent blocks with one simple module

Navarro, G., Tiep, P. & Vallejo, C., Feb 1 2019, In : Transactions of the American Mathematical Society. 371, 2, p. 903-922 20 p.

Research output: Contribution to journalArticle

Simple Module
Representation Theory
Finite Group
Odd
Relationships

BRCA1 Haploinsufficiency Is Masked by RNF168-Mediated Chromatin Ubiquitylation

Zong, D., Adam, S., Wang, Y., Sasanuma, H., Callén, E., Murga, M., Day, A., Kruhlak, M. J., Wong, N., Munro, M., Ray Chaudhuri, A., Karim, B., Xia, B., Takeda, S., Johnson, N., Durocher, D. & Nussenzweig, A., Mar 21 2019, In : Molecular cell. 73, 6, p. 1267-1281.e7

Research output: Contribution to journalArticle

Haploinsufficiency
Genomic Instability
Ubiquitination
Homologous Recombination
Chromatin

Breakfast Consumption, Family Breakfast, and Adiposity Trajectory in Adolescence—The Adolescent Nutritional Assessment Longitudinal Cohort Study

Hassan, B. K., Cunha, D. B., da Veiga, G. V., Pereira, R. A., Hoffman, D. & Sichieri, R., Jan 1 2019, In : Journal of the Academy of Nutrition and Dietetics.

Research output: Contribution to journalArticle

Nutrition Assessment
nutrition assessment
Breakfast
breakfast
Adiposity
Breakfast
Life Style
Mediterranean Diet
Exercise
School Health Services
1 Citation (Scopus)

BREX system of Escherichia coli distinguishes self from non-self by methylation of a specific DNA site

Gordeeva, J., Morozova, N., Sierro, N., Isaev, A., Sinkunas, T., Tsvetkova, K., Matlashov, M., Truncaite, L., Morgan, R. D., Ivanov, N. V., Siksnys, V., Zeng, L. & Severinov, K., Jan 10 2019, In : Nucleic acids research. 47, 1, p. 253-265 13 p.

Research output: Contribution to journalArticle

Bacteriophages
Methylation
Escherichia coli
DNA
CRISPR-Cas Systems
1 Citation (Scopus)

Bridging the Gap: Classroom Strategies Assessment System–Observer Form

Kettler, R., Reddy, L., Glover, T. A. & Kurz, A., Mar 1 2019, In : Assessment for Effective Intervention. 44, 2, p. 120-122 3 p.

Research output: Contribution to journalArticle

Practice Management
Reproducibility of Results
classroom
rating scale
teacher
1 Citation (Scopus)

Brown and beige fat: From molecules to physiology

Chondronikola, M. & Sidossis, L., Jan 1 2019, In : Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids. 1864, 1, p. 91-103 13 p.

Research output: Contribution to journalReview article

White Adipose Tissue
Brown Adipose Tissue
Obesity
Adipose Tissue
Beige Adipose Tissue