Find Research Outputs

2019

Building bigger beta-barrels

Nanda, V., Jan 21 2019, In : eLife. 8

Research output: Contribution to journalArticle

Bacteria
Membranes
Proteins

Caffeine inhibits hypoxia-induced nuclear accumulation in HIF-1α and promotes neonatal neuronal survival

Li, H. L., Zaghloul, N., Ahmed, I., Omelchenko, A., Firestein-Miller, B., Huang, H. & Collins, L., Jul 1 2019, In : Experimental Neurology. 317, p. 66-77 12 p.

Research output: Contribution to journalArticle

Open Access
Caffeine
Apnea
Premature Infants
Adenosine
Brain

Calcinosis Cutis of the Vulva: A Review

Wang, Q. & Heller, D., Jan 1 2019, In : Journal of Lower Genital Tract Disease. 23, 1, p. 75-76 2 p.

Research output: Contribution to journalArticle

Calcinosis
Vulva
Scrotum
Autoimmune Diseases
Cysts

Calebin-A induced death of malignant peripheral nerve sheath tumor cells by activation of histone acetyltransferase

Lee, M. J., Tsai, Y. J., Lin, M. Y., You, H. L., Kalyanam, N., Ho, C-T. & Pan, M. H., Apr 1 2019, In : Phytomedicine. 57, p. 377-384 8 p.

Research output: Contribution to journalArticle

Histone Acetyltransferases
Neurilemmoma
Histones
Curcuma
Neurofibromatosis 1
Industry
Costs
Openness
Disclosure
Secrecy

Cancer stem cell gene profile getting closer to the clinic to enhance precise treatment

Rameshwar, P., Jan 1 2019, In : EBioMedicine.

Research output: Contribution to journalComment/debate

Open Access
Neoplastic Stem Cells
Stem cells
Genes

Candidate gene identification of existing or induced mutations with pipelines applicable to large genomes

Dong, J., Tu, M., Feng, Y., Zdepski, A., Ge, F., Kumar, D., Slovin, J. P. & Messing, J., Feb 1 2019, In : Plant Journal. 97, 4, p. 673-682 10 p.

Research output: Contribution to journalArticle

Genetic Association Studies
mutagenesis
Genome
Zea mays
mutation

Can ethanol intoxication secondary to docetaxel be predicted based on dose administered using a point-of-care saliva ethanol test?

Cheng, S., Awad, N. I., Toomey, K. C., Gibson, Z., Chari, V. & Brunetti, L., Mar 1 2019, In : Journal of Oncology Pharmacy Practice. 25, 2, p. 289-294 6 p.

Research output: Contribution to journalArticle

docetaxel
Point-of-Care Systems
Saliva
Ethanol

Cannabis Use and Anxiety Sensitivity in Relation to Physical Health and Functioning in Post-9/11 Veterans

Stewart, K. L., Farris, S., Jackson, K. M., Borsari, B. & Metrik, J., Feb 15 2019, In : Cognitive Therapy and Research. 43, 1, p. 45-54 10 p.

Research output: Contribution to journalArticle

Veterans
Cannabis
Anxiety
Health
Mental Processes

Can we detect centennial sea-level variations over the last three thousand years in Israeli archaeological records?

Dean, S., Horton, B., Evelpidou, N., Cahill, N., Spada, G. & Sivan, D., Apr 15 2019, In : Quaternary Science Reviews. 210, p. 125-135 11 p.

Research output: Contribution to journalArticle

Glacial geology
uncertainty analysis
Uncertainty analysis
Sea level
quality control
1 Citation (Scopus)

Cardiorespiratory fitness, body mass index and heart failure incidence

Kokkinos, P., Faselis, C., Franklin, B., Lavie, C. J., Sidossis, L., Moore, H., Karasik, P. & Myers, J., Jan 1 2019, In : European Journal of Heart Failure.

Research output: Contribution to journalArticle

Body Mass Index
Heart Failure
Incidence
Exercise Test
Metabolic Equivalent
mesotrione
cranberries
diquat
rhizomes
weed control
1 Citation (Scopus)

Cartoonish sketch-based face editing in videos using identity deformation transfer

Zhao, L., Han, F., Peng, X., Zhang, X., Kapadia, M., Pavlovic, V. & Metaxas, D. N., Apr 1 2019, In : Computers and Graphics (Pergamon). 79, p. 58-68 11 p.

Research output: Contribution to journalArticle

Refining

Casein kinase II–mediated phosphorylation of lipin 1 phosphatidate phosphatase at Ser-285 and Ser-287 regulates its interaction with 14-3-3 protein

Hennessy, M., Granade, M. E., Hassaninasab, A., Wang, D., Kwiatek, J. M., Han, G. S., Harris, T. E. & Carman, G., Jan 1 2019, In : Journal of Biological Chemistry. 294, 7, p. 2365-2374 10 p.

Research output: Contribution to journalArticle

Casein Kinases
Phosphatidate Phosphatase
14-3-3 Proteins
Phosphorylation
Casein Kinase II

Catalytic linkage between caspase activity and proteostasis in Archaea

Seth-Pasricha, M., Senn, S., Sanman, L. E., Bogyo, M., Nanda, V., Bidle, K. A. & Bidle, K., Jan 1 2019, In : Environmental microbiology. 21, 1, p. 286-298 13 p.

Research output: Contribution to journalArticle

caspases
Archaea
Caspases
linkage (genetics)
Haloferax volcanii
1 Citation (Scopus)

CD33 recruitment inhibits IgE-mediated anaphylaxis and desensitizes mast cells to allergen

Duan, S., Koziol-White, C., Jester, W. F., Nycholat, C. M., Macauley, M. S., Panettieri, R. & Paulson, J. C., Mar 1 2019, In : Journal of Clinical Investigation. 129, 3, p. 1387-1401 15 p.

Research output: Contribution to journalArticle

Anaphylaxis
Mast Cells
Allergens
Immunoglobulin E
Immunologic Desensitization

CdZnTe thick film radiation detectors with B and Ga co-doped ZnO contacts

Zou, T., Huang, J., Hu, Y., Tang, K., Zhang, Z., Zhou, X., Shen, Y., Zhang, J., Wang, L. & Lu, Y., Feb 25 2019, In : Surface and Coatings Technology. 360, p. 64-67 4 p.

Research output: Contribution to journalArticle

Radiation detectors
radiation detectors
Gallium
Thick films
thick films

Cell-Based Therapy for Retinal Disease: The New Frontier

Zarbin, M., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 367-381 15 p. (Methods in Molecular Biology; vol. 1834).

Research output: Chapter in Book/Report/Conference proceedingChapter

Retinal Diseases
Retinal Pigment Epithelium
Cell- and Tissue-Based Therapy
Hematopoietic Stem Cells
Transplants

Cell type-specific structural plasticity of the ciliary transition zone in C. elegans

Akella, J. S., Silva, M., Morsci, N. S., Nguyen, K. C., Rice, W. J., Hall, D. H. & Barr, M., Jan 1 2019, In : Biology of the Cell.

Research output: Contribution to journalArticle

Cilia
Microtubules
Head
Caenorhabditis elegans
Sensory Receptor Cells

Central place foragers select ocean surface convergent features despite differing foraging strategies

Oliver, M. J., Kohut, J., Bernard, K., Fraser, W., Winsor, P., Statscewich, H., Fredj, E., Cimino, M., Patterson-Fraser, D. & Carvalho, F., Dec 1 2019, In : Scientific reports. 9, 1, 157.

Research output: Contribution to journalArticle

Spheniscidae
Oceans and Seas
Diving
Sympatry
Climate Change

CG258 Klebsiella pneumoniae isolates without β-lactam resistance at the onset of the carbapenem-resistant Enterobacteriaceae epidemic in New York City

Eilertson, B., Chen, L., Li, A., Chavda, K. D., Chavda, B. & Kreiswirth, B., Jan 1 2019, In : The Journal of antimicrobial chemotherapy. 74, 1, p. 17-21 5 p.

Research output: Contribution to journalArticle

Lactams
Carbapenems
Klebsiella pneumoniae
Enterobacteriaceae
Capsules

Characteristics of Rota–Baxter algebras

Yu, H. & Guo, L., Jan 1 2019, In : Communications in Algebra.

Research output: Contribution to journalArticle

Algebra
Initial Ideal
Prime Ring
Invariant
Ascent
2 Citations (Scopus)

Charged-cell periodic DFT simulations via an impurity model based on density embedding: Application to the ionization potential of liquid water

Tölle, J., Severo Pereira Gomes, A., Ramos, P. & Pavanello, M., Jan 5 2019, In : International Journal of Quantum Chemistry. 119, 1, e25801.

Research output: Contribution to journalArticle

Ionization potential
Discrete Fourier transforms
ionization potentials
embedding
Impurities

Chemical state of phosphorous at the SiC/SiO 2 interface

Pitthan, E., Amarasinghe, V. P., Xu, C., Gobbi, A. L., Dartora, G. H. S., Gustafsson, T., Feldman, L. C. & Stedile, F. C., Apr 1 2019, In : Thin Solid Films. 675, p. 172-176 5 p.

Research output: Contribution to journalArticle

Phosphorus
phosphorus
Silicon
Substrates
Angle measurement
2 Citations (Scopus)

Chemistry of bridged lactams: Recent developments

Szostak, R. & Szostak, M., Jan 12 2019, In : Molecules. 24, 2, 274.

Research output: Contribution to journalReview article

Lactams
amides
chemistry
organic chemistry
Amides

Chemogenetic manipulations of ventral tegmental area dopamine neurons reveal multifaceted roles in cocaine abuse

Mahler, S. V., Brodnik, Z. D., Cox, B. M., Buchta, W. C., Bentzley, B. S., Quintanilla, J., Cope, Z. A., Lin, E. C., Riedy, M. D., Scofield, M. D., Messinger, J., Ruiz, C. M., Riegel, A. C., España, R. A. & Aston Jones, G., Jan 16 2019, In : Journal of Neuroscience. 39, 3, p. 503-518 16 p.

Research output: Contribution to journalArticle

Cocaine-Related Disorders
Ventral Tegmental Area
Dopaminergic Neurons
Cocaine
GTP-Binding Proteins

Children's developing theory of mind and pedagogical evidence selection

Bass, I., Gopnik, A., Hanson, M., Ramarajan, D., Shafto, P., Wellman, H. & Bonawitz, E., Feb 1 2019, In : Developmental psychology. 55, 2, p. 286-302 17 p.

Research output: Contribution to journalArticle

Theory of Mind
Aptitude
Teaching
ability
evidence

Chondrocytes Promote Vascularization in Fracture Healing Through a FOXO1-Dependent Mechanism

Zhang, C., Feinberg, D., Alharbi, M., Ding, Z., Lu, C., O'Connor, J. & Graves, D. T., Mar 1 2019, In : Journal of Bone and Mineral Research. 34, 3, p. 547-556 10 p.

Research output: Contribution to journalArticle

Fracture Healing
Chondrocytes
Vascular Endothelial Growth Factor A
Forkhead Transcription Factors
Closed Fractures
3 Citations (Scopus)

Chronic pain as a symptom or a disease: the IASP Classification of Chronic Pain for the International Classification of Diseases (ICD-11)

Treede, R. D., Rief, W., Barke, A., Aziz, Q., Bennett, M. I., Benoliel, R., Cohen, M., Evers, S., Finnerup, N. B., First, M. B., Giamberardino, M. A., Kaasa, S., Korwisi, B., Kosek, E., Lavandʼhomme, P., Nicholas, M., Perrot, S., Scholz, J., Schug, S., Smith, B. H. & 3 othersSvensson, P., Vlaeyen, J. W. S. & Wang, S. J., Jan 1 2019, In : Pain. 160, 1, p. 19-27 9 p.

Research output: Contribution to journalArticle

International Classification of Diseases
Chronic Pain
Pain
Visceral Pain
Musculoskeletal Pain

Chronopharmacology of glucocorticoids

Scherholz, M. L., Schlesinger, N. & Androulakis, I., Jan 1 2019, In : Advanced Drug Delivery Reviews.

Research output: Contribution to journalArticle

Glucocorticoids
Hydrocortisone
Immunosuppressive Agents
Anti-Inflammatory Agents
Pharmacology

Cisplatin and radiation therapy in HIV-positive women with locally advanced cervical cancer in sub-Saharan Africa: A phase II study of the AIDS malignancy consortium

Einstein, M., Ndlovu, N., Lee, J., Stier, E. A., Kotzen, J., Garg, M., Whitney, K., Lensing, S. Y., Tunmer, M., Kadzatsa, W., Palefsky, J. & Krown, S. E., Apr 1 2019, In : Gynecologic Oncology. 153, 1, p. 20-25 6 p.

Research output: Contribution to journalArticle

Africa South of the Sahara
Uterine Cervical Neoplasms
Cisplatin
Acquired Immunodeficiency Syndrome
Radiotherapy

Citizen science and civic ecology: merging paths to stewardship

Jordan, R., Sorensen, A. E., Biehler, D., Wilson, S. & LaDeau, S., Mar 1 2019, In : Journal of Environmental Studies and Sciences. 9, 1, p. 133-143 11 p.

Research output: Contribution to journalArticle

ecology
citizen
co-management
comanagement
adaptive management

Classification of Rota-Baxter operators on semigroup algebras of order two and three

Zheng, S., Guo, L. & Rosenkranz, M., Jan 1 2019, In : Communications in Algebra.

Research output: Contribution to journalArticle

Open Access
Semigroup Algebra
Operator
Computer Algebra
Mathematica
Verify

Clinical and Magnetic Resonance Imaging Characteristics of Postfenestration Optic Nerve Sheath Pseudomeningoceles

Rafailov, L., Rubinstein, D., Wladis, E. J., Mirani, N., Frohman, L., Langer, P. D. & Turbin, R. E., Mar 1 2019, In : Ophthalmic plastic and reconstructive surgery. 35, 2, p. 159-164 6 p.

Research output: Contribution to journalArticle

Optic Nerve
Magnetic Resonance Imaging
Blister
Cysts
Intracranial Hypertension

Clinical characterization of colitis arising from anti-PD-1 based therapy

Wang, D. Y., Mooradian, M. J., Kim, D. W., Shah, N. J., Fenton, S. E., Conry, R. M., Mehta, R., Silk, A., Zhou, A., Compton, M. L., Al-Rohil, R. N., Lee, S., Voorhees, A. L., Ha, L., McKee, S., Norrell, J. T., Mehnert, J., Puzanov, I., Sosman, J. A., Chandra, S. & 5 othersGibney, G. T., Rapisuwon, S., Eroglu, Z., Sullivan, R. & Johnson, D. B., Jan 2 2019, In : OncoImmunology. 8, 1, e1524695.

Research output: Contribution to journalArticle

Colitis
Steroids
Therapeutics
Prednisone
Melanoma

Clinicopathologic traits and prognostic factors associated with pediatric sinonasal rhabdomyosarcoma

Siddiqui, S. H., Siddiqui, E., Bavier, R. D., Patel, N. M., Kiliç, S., Baredes, S., Hsueh, W. D. & Eloy, J., Jan 1 2019, (Accepted/In press) In : International Forum of Allergy and Rhinology.

Research output: Contribution to journalArticle

Rhabdomyosarcoma
Pediatrics
Survival
Maxillary Sinus
Multivariate Analysis

Closed loop bioreactor system for the ex vivo expansion of human T cells

LI, MATTHEW., CHIN, LING. I. N. G. Y. E. E., SHUKOR, SYUKRI., TAMAYO, ALFRED., MAUS, MARCELA. V. & Parekkadan, B., Jan 1 2019, In : Cytotherapy. 21, 1, p. 76-82 7 p.

Research output: Contribution to journalArticle

Bioreactors
T-Lymphocytes
Cell Proliferation
Silicones
Cell- and Tissue-Based Therapy

Coaching to improve teacher instruction and behavior management in a high poverty school: A case study

Reddy, L., Shernoff, E., Lekwa, A., Matthews, C., Davis, W. & Dudek, C. M., Jan 1 2019, In : School Psychology Quarterly. 34, 1, p. 14-21 8 p.

Research output: Contribution to journalArticle

coaching
Poverty
poverty
instruction
classroom

Coalescence on the real line

Balister, P., Bollobás, B., Lee, J. & Peruvemba Narayanan, B., Mar 1 2019, In : Transactions of the American Mathematical Society. 371, 3, p. 1583-1619 37 p.

Research output: Contribution to journalArticle

Coalescence
Real Line
Color
Interval
Coloring

Coastal dunes with resistant cores

Nordstrom, K., Feb 15 2019, In : Journal of Coastal Conservation. 23, 1, p. 227-237 11 p.

Research output: Contribution to journalReview article

dune
beach
landform
sand
eolian process

CoCo-MD: A Simple and Effective Method for the Enhanced Sampling of Conformational Space

Shkurti, A., Styliari, I. D., Balasubramanian, V., Bethune, I., Pedebos, C., Jha, S. & Laughton, C. A., Jan 1 2019, In : Journal of Chemical Theory and Computation.

Research output: Contribution to journalArticle

sampling
Sampling
principal components analysis
Principal component analysis
Maltose-Binding Proteins

Cognitive behavioral therapy improves diverse profiles of depressive symptoms in Parkinson's disease

Dobkin, R., Mann, S. L., Interian, A., Gara, M. A. & Menza, M., Jan 1 2019, In : International Journal of Geriatric Psychiatry.

Research output: Contribution to journalArticle

Open Access
Cognitive Therapy
Parkinson Disease
Depression
Antidepressive Agents
Equipment and Supplies
Illness Behavior
Health Behavior
Anxiety
Chronic Disease
Anxiety Disorders

Collective Efficacy as a Key Context in Neighborhood Support for Urban Youth

Prince, D. M., Hohl, B., Hunter, B. A., Thompson, A. B., Matlin, S. L., Hausman, A. J. & Tebes, J. K., Mar 1 2019, In : American Journal of Community Psychology. 63, 1-2, p. 179-189 11 p.

Research output: Contribution to journalArticle

Esthetics
aesthetics
youth group
Safety
Social Environment

Colonoscopy utilization in rural areas by general surgeons: An analysis of the National Ambulatory Medical Care Survey

Komaravolu, S. S., Kim, J. J., Singh, S. & Merchant, A., Jan 1 2019, In : American journal of surgery.

Research output: Contribution to journalArticle

Health Care Surveys
Colonoscopy
Medicine
Centers for Disease Control and Prevention (U.S.)
Surgeons

Color-coded molecular beacons for multiplex PCR screening assays

Marras, S., Tyagi, S., Antson, D. O. & Kramer, F., Mar 1 2019, In : PloS one. 14, 3, e0213906.

Research output: Contribution to journalArticle

Open Access
Multiplex Polymerase Chain Reaction
Assays
Screening
Color
screening
3 Citations (Scopus)

Color vision impairments in schizophrenia and the role of antipsychotic medication type

Fernandes, T. M. P., Silverstein, S., Butler, P. D., Kéri, S., Santos, L. G., Nogueira, R. L. & Santos, N. A., Feb 1 2019, In : Schizophrenia Research. 204, p. 162-170 9 p.

Research output: Contribution to journalArticle

Color Vision
Antipsychotic Agents
Schizophrenia
Retina
Color Perception

Combining Evolutionary Covariance and NMR Data for Protein Structure Determination

Huang, Y. J., Brock, K. P., Ishida, Y., Swapna, G. V. T., Inouye, M., Marks, D. S., Sander, C. & Montelione, G., Jan 1 2019, Methods in Enzymology. Wand, A. J. (ed.). Academic Press Inc., p. 363-392 30 p. (Methods in Enzymology; vol. 614).

Research output: Chapter in Book/Report/Conference proceedingChapter

Nuclear magnetic resonance
Proteins
X ray crystallography
X Ray Crystallography
Excited states

Common cell lines used to study bone morphogenetic proteins (BMPs)

Cottrell, J. A., Burgess, D., Michaels, S. & Rogers, M., Jan 1 2019, Methods in Molecular Biology. Humana Press Inc., p. 1-8 8 p. (Methods in Molecular Biology; vol. 1891).

Research output: Chapter in Book/Report/Conference proceedingChapter

Bone Morphogenetic Protein 2
Bone Morphogenetic Proteins
Osteogenesis
Culture Media
Cell Line