Find Research Outputs

2019

Coulomb-interaction effect on the two-dimensional electronic structure of the van der Waals ferromagnet C r2 G e2 T e6

Suzuki, M., Gao, B., Koshiishi, K., Nakata, S., Hagiwara, K., Lin, C., Wan, Y. X., Kumigashira, H., Ono, K., Kang, S., Kang, S., Yu, J., Kobayashi, M., Cheong, S-W. & Fujimori, A., Apr 1 2019, In : Physical Review B. 99, 16, 161401.

Research output: Contribution to journalArticle

Coulomb interactions
Discrete Fourier transforms
Electronic structure
electronic structure
interlayers

Coulomb problem in iron-based superconductors

König, E. J. & Coleman, P., Apr 26 2019, In : Physical Review B. 99, 14, 144522.

Research output: Contribution to journalArticle

condensates
Coulomb interactions
iron
Superconducting materials
Superconducting transition temperature

Couple-focused interventions for men with localized prostate cancer and their spouses: A randomized clinical trial

Manne, S., Kashy, D. A., Zaider, T., Kissane, D., Lee, D., Kim, I., Heckman, C., Penedo, F. J., Murphy, E. & Virtue, S. M., May 1 2019, In : British journal of health psychology. 24, 2, p. 396-418 23 p.

Research output: Contribution to journalArticle

Spouses
Prostatic Neoplasms
Randomized Controlled Trials
Psychology
Therapeutics
1 Citation (Scopus)

Co-use of Electronic Nicotine Delivery Systems and Combustible Cigarettes, and Their Association with Internalizing Pathology and Vulnerabilities

Versella, M. V., Borges, A. M., Lin, C. & Leyro, T., Feb 15 2019, In : Cognitive Therapy and Research. 43, 1, p. 114-120 7 p.

Research output: Contribution to journalArticle

Nicotine
Tobacco Products
Pathology
Anxiety
Emotions

CpG methyl-seq and RNA-seq epigenomic and transcriptomic studies on the preventive effects of Moringa isothiocyanate in mouse epidermal JB6 cells induced by the tumor promoter TPA

Wang, C., Wu, R., Sargsyan, D., Zheng, M., Li, S., Yin, R., Su, S., Raskin, I. & Kong, A-N., Jun 1 2019, In : Journal of Nutritional Biochemistry. 68, p. 69-78 10 p.

Research output: Contribution to journalArticle

Moringa
Epigenomics
Carcinogens
Genes
RNA

Creating stable interfaces between reactive materials: titanium nitride protects photoabsorber-catalyst interface in water-splitting photocathodes

Hwang, S., Porter, S. H., Laursen, A. B., Yang, H., Li, M., Manichev, V., Calvinho, K. U. D., Amarasinghe, V., Greenblatt, M., Garfunkel, E. & Dismukes, G., Jan 1 2019, In : Journal of Materials Chemistry A. 7, 5, p. 2400-2411 12 p.

Research output: Contribution to journalArticle

Photocathodes
Titanium nitride
Photocurrents
Catalysts
Water

CRISPR–Cas molecular beacons as tool for studies of assembly of CRISPR–Cas effector complexes and their interactions with DNA

Mekler, V., Kuznedelov, K., Minakhin, L., Murugan, K., Sashital, D. G. & Severinov, K., Jan 1 2019, Methods in Enzymology. Bailey, S. (ed.). Academic Press Inc., p. 337-363 27 p. (Methods in Enzymology; vol. 616).

Research output: Chapter in Book/Report/Conference proceedingChapter

Clustered Regularly Interspaced Short Palindromic Repeats
DNA
Nucleic acid sequences
RNA
Prokaryotic Cells

Critical Behavior and Universality Classes for an Algorithmic Phase Transition in Sparse Reconstruction

Ramezanali, M., Mitra, P. P. & Sengupta, A., May 15 2019, In : Journal of Statistical Physics. 175, 3-4, p. 764-788 25 p.

Research output: Contribution to journalArticle

Critical Behavior
Mean Squared Error
Universality
Critical Curves
Phase Transition

Critical Conditions of Adhesion and Separation of Functionalized Nanoparticles on Polymer Grafted Substrates

Santo, K. P., Vishnyakov, A., Brun, Y. & Neimark, A., Jan 1 2019, In : Journal of Physical Chemistry C.

Research output: Contribution to journalArticle

Polymers
adhesion
Adhesion
Nanoparticles
nanoparticles

Cross-diagnostic analysis of cognitive control in mental illness: Insights from the CNTRACS consortium

Smucny, J., Barch, D. M., Gold, J. M., Strauss, M. E., MacDonald, A. W., Boudewyn, M. A., Ragland, J. D., Silverstein, S. & Carter, C. S., Jun 1 2019, In : Schizophrenia Research. 208, p. 377-383 7 p.

Research output: Contribution to journalArticle

Bipolar Disorder
Schizophrenia
Psychiatry
Task Performance and Analysis
Psychotic Disorders

Crossing the Thauer limit: Rewiring cyanobacterial metabolism to maximize fermentative H2 production

Kumaraswamy, K. G., Krishnan, A., Ananyev, G., Zhang, S., Bryant, D. A. & Dismukes, G., Mar 1 2019, In : Energy and Environmental Science. 12, 3, p. 1035-1045 11 p.

Research output: Contribution to journalArticle

Metabolism
Glucose
glucose
Pentoses
metabolism

Cross-linguistic variation in the meaning of quantifiers: Implications for pragmatic enrichment

Stateva, P., Stepanov, A., Deprez, V., Dupuy, L. E. & Reboul, A. C., Jan 1 2019, In : Frontiers in Psychology. 10, APR, 957.

Research output: Contribution to journalArticle

Open Access
Linguistics
Intuition
Population Groups
Surveys and Questionnaires
2 Citations (Scopus)

Crosstalk between presynaptic trafficking and autophagy in Parkinson's disease

Pan, P., Zhu, Y., Shen, Y. & Yue, Z., Feb 1 2019, In : Neurobiology of Disease. 122, p. 64-71 8 p.

Research output: Contribution to journalReview article

Autophagy
Parkinson Disease
Synaptic Vesicles
Presynaptic Terminals
Overlapping Genes

Cryo-EM structure and in vitro DNA packaging of a thermophilic virus with supersized T=7 capsids

Bayfield, O. W., Klimuk, E., Winkler, D. C., Hesketh, E. L., Chechik, M., Cheng, N., Dykeman, E. C., Minakhin, L., Ranson, N. A., Severinov, K., Steven, A. C. & Antson, A. A., Feb 26 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 9, p. 3556-3561 6 p.

Research output: Contribution to journalArticle

DNA Packaging
Capsid
Viruses
DNA
Product Packaging

Crystallization behavior of iron- and boron-containing nepheline (Na 2 O·Al 2 O 3 ·2SiO 2 ) based model high-level nuclear waste glasses

Deshkar, A., Ahmadzadeh, M., Scrimshire, A., Han, E., Bingham, P. A., Guillen, D., McCloy, J. & Goel, A., Mar 1 2019, In : Journal of the American Ceramic Society. 102, 3, p. 1101-1121 21 p.

Research output: Contribution to journalArticle

Radioactive Waste
Boron
Crystallization
Radioactive wastes
Glass ceramics

Crystallographic identification of a series of manganese porphyrin complexes with nitrogenous bases

Lahanas, N., Kucheryavy, P., Lalancette, R. & Lockard, J., Jan 1 2019, In : Acta Crystallographica Section C: Structural Chemistry. 75, p. 304-312 9 p.

Research output: Contribution to journalArticle

Porphyrins
Manganese
porphyrins
manganese
octanes

CSC-3436 inhibits TWIST-induced epithelial–mesenchymal transition via the suppression of Twist/Bmi1/Akt pathway in head and neck squamous cell carcinoma

Lai, Y. J., Yu, W. N., Kuo, S. C., Ho, C-T., Hung, C. M., Way, T. D. & Chen, C. T., Jun 1 2019, In : Journal of Cellular Physiology. 234, 6, p. 9118-9129 12 p.

Research output: Contribution to journalArticle

Cadherins
Tumors
Neoplasms
Virus Integration
Moloney murine leukemia virus

Cuttlefish: Color Mapping for Dynamic Multi-Scale Visualizations

Waldin, N., Waldner, M., Le Muzic, M., Gröller, E., Goodsell, D., Autin, L., Olson, A. J. & Viola, I., Jan 1 2019, In : Computer Graphics Forum.

Research output: Contribution to journalArticle

Open Access
Visualization
Color
Coloring
Macromolecules
Viruses

CVD diamond film detectors for α particles with a new electrode structure of reduced graphene oxide/Au

Zhang, Z., Huang, J., Xi, Y., Zhou, X., Tang, K., Xia, Y., Lu, Y. & Wang, L., Mar 1 2019, In : Materials Science in Semiconductor Processing. 91, p. 260-266 7 p.

Research output: Contribution to journalArticle

Graphite
Diamond films
diamond films
Oxides
Graphene
5 Citations (Scopus)

Cyber-physical resilience: Definition and assessment metric

Clark, A. & Aliari Zonouz, S., Mar 1 2019, In : IEEE Transactions on Smart Grid. 10, 2, p. 1671-1684 14 p., 8118199.

Research output: Contribution to journalArticle

Linear systems
Recovery
Toughness
Elasticity
Actuators

Cycling quiescence in temozolomide resistant glioblastoma cells is partly explained by microRNA-93 and -193-mediated decrease of cyclin D

Munoz, J. L., Walker, N. D., Mareedu, S., Pamarthi, S. H., Sinha, G., Greco, S. J. & Rameshwar, P., Jan 1 2019, In : Frontiers in Pharmacology. 10, FEB, 134.

Research output: Contribution to journalArticle

Open Access
temozolomide
Cyclin D
Glioblastoma
MicroRNAs
Cell Cycle
3 Citations (Scopus)

Cystinuria: genetic aspects, mouse models, and a new approach to therapy

Sahota, A., Tischfield, J., Goldfarb, D. S., Ward, M. D. & Hu, L., Feb 5 2019, In : Urolithiasis. 47, 1, p. 57-66 10 p.

Research output: Contribution to journalReview article

Cystinuria
Cystine
Therapeutics
Crystallization
Diamide

Cytokine Therapy

Silk, A. & Margolin, K., Jan 1 2019, (Accepted/In press) In : Hematology/Oncology Clinics of North America.

Research output: Contribution to journalArticle

Cytokines
Therapeutics
Neoplasms
Direction compound

Cytological Immunostaining of HMGA2, LRP1B, and TP63 as Potential Biomarkers for Triaging Human Papillomavirus-Positive Women

Jiang, Y., Zhu, C., He, D., Gao, Q., Tian, X., Ma, X., Wu, J., Das, B. C., Severinov, K., Hitzeroth, I. I., Debata, P. R., Liu, R., Zou, L., Shi, L., Xu, H., Wang, K., Bao, Y., Ka-Kit, L. R., You, Z., Cui, Z. & 1 othersHu, Z., Jul 1 2019, In : Translational Oncology. 12, 7, p. 959-967 9 p.

Research output: Contribution to journalArticle

Open Access
Biomarkers
Triage
Area Under Curve
ROC Curve
Sensitivity and Specificity

D3R Grand Challenge 3: blind prediction of protein–ligand poses and affinity rankings

Gaieb, Z., Parks, C. D., Chiu, M., Yang, H., Shao, C., Walters, W. P., Lambert, M. H., Nevins, N., Bembenek, S. D., Ameriks, M. K., Mirzadegan, T., Burley, S., Amaro, R. E. & Gilson, M. K., Jan 15 2019, In : Journal of Computer-Aided Molecular Design. 33, 1

Research output: Contribution to journalArticle

cathepsin S
Teaching Rounds
ranking
Drug Design
Protein S

Daily Fractionation of External Beam Accelerated Partial Breast Irradiation to 40 Gy Is Well Tolerated and Locally Effective

Braunstein, L. Z., Thor, M., Flynn, J., Cost, Z., Wilgucki, M., Rosenbaum, S., Zhang, Z., Gillespie, E., McCormick, B., Khan, A., Ho, A., Cahlon, O., Deasy, J. O. & Powell, S. N., Jan 1 2019, In : International Journal of Radiation Oncology Biology Physics.

Research output: Contribution to journalArticle

fractionation
breast
Breast
irradiation
toxicity

D-Allulose is a substrate of glucose transporter type 5 (GLUT5) in the small intestine

Kishida, K., Martinez, G., Iida, T., Yamada, T., Ferraris, R. & Toyoda, Y., Mar 30 2019, In : Food Chemistry. 277, p. 604-608 5 p.

Research output: Contribution to journalArticle

Glucose Transporter Type 5
psicose
glucose transporters
Small Intestine
small intestine

Damage Resistant Glass-Ceramic

Goel, A., Apr 2019

Research output: Innovation

Glass ceramics
Glass
Low temperature production
Cracks
Defects

Dancing in the Dark: Uncertainty in Ultrafaint Dwarf Galaxy Predictions from Cosmological Simulations

Munshi, F., Brooks, A., Christensen, C., Applebaum, E., Holley-Bockelmann, K., Quinn, T. R. & Wadsley, J., Mar 20 2019, In : Astrophysical Journal. 874, 1, 40.

Research output: Contribution to journalArticle

dwarf galaxies
star formation
physics
prediction
predictions
Inbred WKY Rats
Anxiety
Learning
Safety
Sprague Dawley Rats

Data Cyber-Infrastructure for End-to-end Science: Experiences from the NSF Ocean Observatories Initiative

Rodero, I. & Parashar, M., Jan 1 2019, (Accepted/In press) In : Computing in Science and Engineering.

Research output: Contribution to journalArticle

Observatories
Cloud computing
Architectural design
Sensors
Processing
2 Citations (Scopus)

Data-Driven Robust Taxi Dispatch under Demand Uncertainties

Miao, F., Han, S., Lin, S., Wang, Q., Stankovic, J. A., Hendawi, A., Zhang, D., He, T. & Pappas, G. J., Jan 1 2019, In : IEEE Transactions on Control Systems Technology. 27, 1, p. 175-191 17 p., 8105899.

Research output: Contribution to journalArticle

Sensors
Testing
Uncertainty
High-Throughput Nucleotide Sequencing
Peptide Hydrolases
Learning
Hepacivirus
Yeasts

Daywake, an Anti-siesta Gene Linked to a Splicing-Based Thermostat from an Adjoining Clock Gene

Yang, Y. & Edery, I., May 20 2019, In : Current Biology. 29, 10, p. 1728-1734.e4

Research output: Contribution to journalArticle

thermostats
Thermostats
Clocks
Genes
Introns

Decadal-scale variability of sardine and anchovy simulated with an end-to-end coupled model of the Canary Current ecosystem

Sánchez-Garrido, J. C., Werner, F. E., Fiechter, J., Rose, K. A., Curchitser, E., Ramos, A., García Lafuente, J., Arístegui, J., Hernández-León, S. & Rodríguez Santana, A., Feb 1 2019, In : Progress in Oceanography. 171, p. 212-230 19 p.

Research output: Contribution to journalArticle

canaries
anchovies
sardines
upwelling
ecosystems
1 Citation (Scopus)

Decarbonylative Borylation of Amides by Palladium Catalysis

Shi, S. & Szostak, M., Mar 5 2019, In : ACS Omega. 4, 3, p. 4901-4907 7 p.

Research output: Contribution to journalArticle

Palladium
Amides
Catalysis
Ground state
Functional groups

Decentralized temporal independent component analysis: Leveraging fMRI data in collaborative settings

Baker, B. T., Abrol, A., Silva, R. F., Damaraju, E., Sarwate, A., Calhoun, V. D. & Plis, S. M., Feb 1 2019, In : NeuroImage. 186, p. 557-569 13 p.

Research output: Contribution to journalArticle

Joints
Privacy
Magnetic Resonance Imaging
Research
Activation Analysis

Decisional conflict among breast cancer patients considering contralateral prophylactic mastectomy

Manne, S., Smith, B., Mitarotondo, A., Frederick, S., Toppmeyer, D. & Kirstein, L., May 1 2019, In : Patient Education and Counseling. 102, 5, p. 902-908 7 p.

Research output: Contribution to journalArticle

Breast Neoplasms
Self Efficacy
Motivation
Neoplasms
Foster Home Care

Declining recommended surgery in primary cutaneous melanoma: an analysis of risk factors and survival

Elias, M. L., John, A. M., Weisberger, J. S., Lambert, W. C. & Schwartz, R., Jan 1 2019, In : Journal of the European Academy of Dermatology and Venereology.

Research output: Contribution to journalLetter

Survival Analysis
Melanoma
Skin

Decoding CUDA Binary

Hayes, A. B., Hua, F., Huang, J., Chen, Y. & Zhang, Z., Mar 5 2019, CGO 2019 - Proceedings of the 2019 IEEE/ACM International Symposium on Code Generation and Optimization. Moseley, T., Jimborean, A. & Kandemir, M. T. (eds.). Institute of Electrical and Electronics Engineers Inc., p. 229-241 13 p. 8661186. (CGO 2019 - Proceedings of the 2019 IEEE/ACM International Symposium on Code Generation and Optimization).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Decoding
Binary
Instrumentation
Resource Allocation
Resource allocation

Decoding epigenetic cell signaling in neuronal differentiation

Vieira, M. S., Goulart, V. A. M., Parreira, R. C., Oliveira-Lima, O. C., Glaser, T., Naaldijk, Y. M., Ferrer, A., Savanur, V. H., Reyes, P. A., Sandiford, O., Rameshwar, P., Ulrich, H., Pinto, M. C. X. & Resende, R. R., Jan 1 2019, (Accepted/In press) In : Seminars in Cell and Developmental Biology.

Research output: Contribution to journalArticle

Epigenomics
Neurons
Untranslated RNA
Neural Stem Cells
Transcription Factors

Decomposition numbers and local properties

Navarro, G. & Tiep, P., Jan 1 2019, In : Journal of Algebra.

Research output: Contribution to journalArticle

Matrix Decomposition
Normalizer
Local Properties
Finite Group
Decompose

Decreased Fecal Bacterial Diversity and Altered Microbiome in Children Colonized With Clostridium difficile

Chen, L. A., Hourigan, S. K., Grigoryan, Z., Gao, Z., Clemente, J. C., Rideout, J. R., Chirumamilla, S., Rabidazeh, S., Saeed, S., Elson, C. O., Oliva-Hemker, M., Blaser, M. & Sears, C. L., Apr 1 2019, In : Journal of pediatric gastroenterology and nutrition. 68, 4, p. 502-508 7 p.

Research output: Contribution to journalArticle

Clostridium difficile
Microbiota
Inflammatory Bowel Diseases
Clostridium Infections
Anti-Bacterial Agents
2 Citations (Scopus)

Defining the seed sequence of the Cas12b CRISPR-Cas effector complex

Jain, I., Minakhin, L., Mekler, V., Sitnik, V., Rubanova, N., Severinov, K. & Semenova, E., Apr 3 2019, In : RNA Biology. 16, 4, p. 413-422 10 p.

Research output: Contribution to journalArticle

Clustered Regularly Interspaced Short Palindromic Repeats
Seeds
Guide RNA
Alicyclobacillus
Amino Acid Motifs

Deformations and Their Controlling Cohomologies of O -Operators

Tang, R., Bai, C., Guo, L. & Sheng, Y., Jan 1 2019, In : Communications In Mathematical Physics.

Research output: Contribution to journalArticle

homology
Cohomology
operators
Operator
algebra

Delayed-Onset Cyst Formation After Laser Interstitial Thermal Therapy: Unreported Long-Term Complication

Carminucci, A., Parr, M., Bitar, M. & Danish, S., Apr 1 2019, In : World Neurosurgery. 124, p. 219-223 5 p.

Research output: Contribution to journalArticle

Gliosis
Sclerosis
Blood Vessels
Cysts
Lasers

Deletion of FOXO1 in chondrocytes rescues the effect of diabetes on mechanical strength in fracture healing

Lu, Y., Alharbi, M., Zhang, C., O'Connor, J. & Graves, D. T., Jun 1 2019, In : Bone. 123, p. 159-167 9 p.

Research output: Contribution to journalArticle

Fracture Healing
Chondrocytes
Bone and Bones
Bony Callus
Cartilage

Delivery of neurotrophic factors in a silk-based nerve conduit for peripheral nerve repair

Carvalho, C. R., Chang, W., Reis, R. L., Oliveira, J. M. & Kohn, J., Jan 1 2019, Society for Biomaterials Annual Meeting and Exposition 2019: The Pinnacle of Biomaterials Innovation and Excellence - Transactions of the 42nd Annual Meeting. Society for Biomaterials, 1 p. (Transactions of the Annual Meeting of the Society for Biomaterials and the Annual International Biomaterials Symposium; vol. 40).

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Silk
Nerve Growth Factors
Peripheral Nerves
Repair
Nerve Regeneration

Dementia Family Caregivers’ Willingness to Pay for an In-home Program to Reduce Behavioral Symptoms and Caregiver Stress

Jutkowitz, E., Scerpella, D., Pizzi, L., Marx, K., Samus, Q., Piersol, C. V. & Gitlin, L. N., Jan 1 2019, In : PharmacoEconomics.

Research output: Contribution to journalArticle

Behavioral Symptoms
Caregivers
Dementia
Confidence Intervals
Cognition

Democracy's deficit: The role of institutional contact in shaping non-white political behavior

Garciá-Castanõn, M., Huckle, K., Walker, H. & Chong, C., Mar 1 2019, In : Journal of Race, Ethnicity and Politics. 4, 1, p. 1-31 31 p.

Research output: Contribution to journalArticle

Open Access
political behavior
deficit
contact
democracy
mobilization