Find Research Outputs

2019
1 Citation (Scopus)

Genetic reduction of eEF2 kinase alleviates pathophysiology in Alzheimer’s disease model mice

Beckelman, B. C., Yang, W., Kasica, N. P., Zimmermann, H. R., Zhou, X., Keene, C. D., Ryazanov, A. & Ma, T., Feb 1 2019, In : Journal of Clinical Investigation. 129, 2, p. 820-833 14 p.

Research output: Contribution to journalArticle

Elongation Factor 2 Kinase
Alzheimer Disease
Peptide Elongation Factor 2
Proteins
Post-Synaptic Density

Genome analysis of the rice coral Montipora capitata

Shumaker, A., Putnam, H. M., Qiu, H., Price, D. C., Zelzion, E., Harel, A., Wagner, N. E., Gates, R. D., Yoon, H. S. & Bhattacharya, D., Dec 1 2019, In : Scientific reports. 9, 1, 2571.

Research output: Contribution to journalArticle

Open Access
Anthozoa
Genome
Cnidaria
Coral Reefs
Dinoflagellida

Genome-Wide Screening for Enteric Colonization Factors in Carbapenem-Resistant ST258 Klebsiella pneumoniae

Jung, H. J., Littmann, E. R., Seok, R., Leiner, I. M., Taur, Y., Peled, J., van den Brink, M., Ling, L., Chen, L., Kreiswirth, B., Goodman, A. L. & Pamer, E. G., Mar 12 2019, In : mBio. 10, 2

Research output: Contribution to journalArticle

Open Access
Carbapenems
Opportunistic Infections
Klebsiella pneumoniae
Multiple Drug Resistance
Genome
Vaccinium macrocarpon
Herbivory
cranberries
phenotypic plasticity
Gene expression
1 Citation (Scopus)

Geochemical characteristics from tests of four modern planktonic foraminiferal species in the Indonesian Throughflow region and their implications

Zhang, P., Zuraida, R., Rosenthal, Y., Holbourn, A., Kuhnt, W. & Xu, J., Mar 1 2019, In : Geoscience Frontiers. 10, 2, p. 505-516 12 p.

Research output: Contribution to journalArticle

throughflow
mixed layer
calcification
salinity
geochemistry

Geometrically finite amalgamations of hyperbolic 3-manifold groups are not LERF

Sun, H., Feb 1 2019, In : Proceedings of the London Mathematical Society. 118, 2, p. 257-283 27 p.

Research output: Contribution to journalArticle

Residually Finite
Hyperbolic 3-manifold
Amalgamation
Fundamental Group
Subgroup

Geometry and arithmetic of crystallographic sphere packings

Kontorovich, A. & Nakamura, K., Jan 8 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 2, p. 436-441 6 p.

Research output: Contribution to journalArticle

Direction compound

Geophysical Monitoring of Hydrocarbon Biodegradation in Highly Conductive Environments

Kimak, C., Ntarlagiannis, D., Slater, L., Atekwana, E. A., Beaver, C. L., Rossbach, S., Porter, A. & Ustra, A., Feb 1 2019, In : Journal of Geophysical Research: Biogeosciences. 124, 2, p. 353-366 14 p.

Research output: Contribution to journalArticle

biodegradation
Hydrocarbons
Biodegradation
induced polarization
hydrocarbons
1 Citation (Scopus)

Giant topological Hall effect in correlated oxide thin films

Vistoli, L., Wang, W., Sander, A., Zhu, Q., Casals, B., Cichelero, R., Barthélémy, A., Fusil, S., Herranz, G., Valencia, S., Abrudan, R., Weschke, E., Nakazawa, K., Kohno, H., Santamaria, J., Wu, W., Garcia, V. & Bibes, M., Jan 1 2019, In : Nature Physics. 15, 1, p. 67-72 6 p.

Research output: Contribution to journalArticle

Hall effect
oxides
thin films
textures
thermoelectricity

Global contributors to antibiotic resistance

Chokshi, A., Sifri, Z., Cennimo, D. & Horng, H., Jan 1 2019, In : Journal of Global Infectious Diseases. 11, 1, p. 36-42 7 p.

Research output: Contribution to journalArticle

Open Access
Microbial Drug Resistance
Anti-Bacterial Agents
Developed Countries
Developing Countries
Research

Global reconstruction of life-history strategies: A case study using tunas

Horswill, C., Kindsvater, H., Juan-Jordá, M. J., Dulvy, N. K., Mangel, M. & Matthiopoulos, J., Jan 1 2019, In : Journal of Applied Ecology.

Research output: Contribution to journalArticle

life history
life history theory
fishery
extinction risk
population decline

Glucocorticoid Receptor-Binding and Transcriptome Signature in Cardiomyocytes

Severinova, E., Alikunju, S., Deng, W., Dhawan, P., Sayed, N. & Sayed, D., Mar 19 2019, In : Journal of the American Heart Association. 8, 6, p. e011484

Research output: Contribution to journalArticle

Open Access
Glucocorticoid Receptors
Gene Expression Regulation
Transcriptome
Cardiac Myocytes
Hypertrophy

Glycopolymers/PEI complexes as serum-tolerant vectors for enhanced gene delivery to hepatocytes

Zhao, L., Li, Y., Pei, D., Huang, Q., Zhang, H., Yang, Z., Li, F. & Shi, T., Feb 1 2019, In : Carbohydrate Polymers. 205, p. 167-175 9 p.

Research output: Contribution to journalArticle

Polyetherimides
Genes
Plasmids
DNA
Hepatocytes

Glycosylation of an allenic erythronolide

Yu, L., Wang, H., Akhmedov, N. & Williams, L., Jan 1 2019, In : Journal of Antibiotics.

Research output: Contribution to journalArticle

sulfoxide
Glycosylation
Macrolides
propadiene
desosamine

Governing fisheries in the face of change: Social responses to long-term geographic shifts in a U.S. fishery

Dubik, B. A., Clark, E. C., Young, T., Zigler, S. B. J., Provost, M. M., Pinsky, M. & St. Martin, K., Jan 1 2019, In : Marine Policy. 99, p. 243-251 9 p.

Research output: Contribution to journalArticle

social change
fishery
Paralichthys dentatus
fisheries
narrative

Governing the recreational dimension of global fisheries

Arlinghaus, R., Abbott, J. K., Fenichel, E. P., Carpenter, S. R., Hunt, L. M., Alós, J., Klefoth, T., Cooke, S. J., Hilborn, R., Jensen, O., Wilberg, M. J., Post, J. R. & Manfredo, M. J., Jan 1 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 12, p. 5209-5213 5 p.

Research output: Contribution to journalComment/debate

Open Access

Graft-versus-host disease propagation depends on increased intestinal epithelial tight junction permeability

Nalle, S. C., Zuo, L., Ong, M. L. D. M., Singh, G., Worthylake, A. M., Choi, W., Manresa, M. C., Southworth, A. P., Edelblum, K., Baker, G. J., Joseph, N. E., Savage, P. A. & Turner, J. R., Feb 1 2019, In : Journal of Clinical Investigation. 129, 2, p. 902-914 13 p.

Research output: Contribution to journalArticle

Tight Junctions
Graft vs Host Disease
Permeability
T-Lymphocytes
Hematopoietic Stem Cell Transplantation

Gray divorce: Explaining midlife marital splits

Crowley, J., Jan 2 2019, In : Journal of Women and Aging. 31, 1, p. 49-72 24 p.

Research output: Contribution to journalArticle

Divorce
Marriage
divorce
marriage
baby

Green Tea Polyphenols Modify the Gut Microbiome in db/db Mice as Co-Abundance Groups Correlating with the Blood Glucose Lowering Effect

Chen, T., Liu, A. B., Sun, S., Ajami, N. J., Ross, M. C., Wang, H., Zhang, L., Reuhl, K., Kobayashi, K., Onishi, J. C., Zhao, L. & Yang, C., Jan 1 2019, In : Molecular Nutrition and Food Research. 1801064.

Research output: Contribution to journalArticle

Polyphenols
green tea
Tea
theaflavins
blood glucose

Growth hormone therapy in children; research and practice – A review

Collett-Solberg, P. F., Jorge, A. A. L., Boguszewski, M. C. S., Miller, B. S., Choong, C. S. Y., Cohen, P., Hoffman, A. R., Luo, X., Radovick, S. & Saenger, P., Feb 1 2019, In : Growth Hormone and IGF Research. 44, p. 20-32 13 p.

Research output: Contribution to journalReview article

Growth Hormone
Research
Human Growth Hormone
Growth
Molecular Biology
1 Citation (Scopus)

Guess check codes for deletions, insertions, and synchronization

Hanna, S. K. & El Rouayheb, S., Jan 1 2019, In : IEEE Transactions on Information Theory. 65, 1, p. 3-15 13 p., 8368277.

Research output: Contribution to journalArticle

Decoding
Synchronization
redundancy
Redundancy
Polynomials

Guest Editorial: Special Issue on the 2016 Workshop on the Algorithmic Foundations of Robotics (WAFR)

Bekris, K. & Kavraki, L. E., Mar 1 2019, In : International Journal of Robotics Research. 38, 2-3, p. 93-94 2 p.

Research output: Contribution to journalEditorial

Robotics

Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry

Colle, M., Leisner, C. P., Wai, C. M., Ou, S., Bird, K. A., Wang, J., Wisecaver, J. H., Yocca, A. E., Alger, E. I., Tang, H., Xiong, Z., Callow, P., Ben-Zvi, G., Brodt, A., Baruch, K., Swale, T., Shiue, L., Song, G. Q., Childs, K. L., Schilmiller, A. & 5 othersVorsa, N., Buell, C. R., VanBuren, R., Jiang, N. & Edger, P. P., Mar 1 2019, In : GigaScience. 8, 3

Research output: Contribution to journalArticle

Open Access
Vaccinium
Blueberry Plants
Polyploidy
Tetraploidy
Phytochemicals

Harvesting waste heat energy by promoting H + -ion concentration difference with a fuel cell structure

Liu, Y., Chen, Y., Ming, J., Chen, L., Shu, C., Qu, T., Tan, Q., Liu, Y. & Asefa, T., Mar 1 2019, In : Nano Energy. 57, p. 101-107 7 p.

Research output: Contribution to journalArticle

Waste heat
Fuel cells
Ions
Electricity
Anodes

HBV infection-induced liver cirrhosis development in dual-humanised mice with human bone mesenchymal stem cell transplantation

Yuan, L., Jiang, J., Liu, X., Zhang, Y., Zhang, L., Xin, J., Wu, K., Li, X., Cao, J., Guo, X., Shi, D., Li, J., Jiang, L., Sun, S., Wang, T., Hou, W., Zhang, T., Zhu, H., Zhang, J., Yuan, Q. & 2 othersCheng, T. & Xia, N., Jan 1 2019, In : Gut.

Research output: Contribution to journalArticle

Mesenchymal Stem Cell Transplantation
Virus Diseases
Hepatitis B virus
Liver Cirrhosis
Mesenchymal Stromal Cells

Health policy engagement among graduate nursing students in the United States

de Cordova, P., Steck, M. B. W., Vermeesch, A., Pierre, N., Rankin, A., Ohlendorf, J. M., Lawrence, S. & Derouin, A., Jan 1 2019, In : Nursing forum. 54, 1, p. 38-44 7 p.

Research output: Contribution to journalArticle

Nursing Students
Health Policy
Nursing
Students
Curriculum

Health-related issues impacting older adults

Conway, F., Mar 4 2019, In : Journal of Women and Aging. 31, 2, p. 93-94 2 p.

Research output: Contribution to journalEditorial

Health
health
1 Citation (Scopus)

Heightened olfactory dysfunction and oral irritation among chronic smokers and heightened propylthiouracil (PROP) bitterness among menthol smokers

Duffy, V. B., Glennon, S. G., Larsen, B. A., Rawal, S., Oncken, C. & Litt, M. D., Mar 15 2019, In : Physiology and Behavior. 201, p. 111-122 12 p.

Research output: Contribution to journalArticle

Menthol
Propylthiouracil
Tobacco Products
Smell
Nutrition Surveys

Hemothelium, Clonal Hematopoiesis of Indeterminate Potential, and Atherosclerosis

Aviv, A. & Levy, D., Jan 2 2019, In : Circulation. 139, 1, p. 7-9 3 p.

Research output: Contribution to journalArticle

Hematopoietic System
Telomere
Hematopoiesis
Vascular Endothelium
Atherosclerosis

Hepatic carboxylesterases are differentially regulated in PPARα-null mice treated with perfluorooctanoic acid

Wen, X., Baker, A. A., Klaassen, C. D., Corton, J. C., Richardson, J. R. & Aleksunes, L., Mar 15 2019, In : Toxicology. 416, p. 15-22 8 p.

Research output: Contribution to journalArticle

perfluorooctanoic acid
Carboxylic Ester Hydrolases
Peroxisome Proliferator-Activated Receptors
Liver
Messenger RNA
1 Citation (Scopus)

Heteroatom-Doped Carbon Materials for Hydrazine Oxidation

Zhang, T. & Asefa, T., Mar 27 2019, In : Advanced Materials. 31, 13, 1804394.

Research output: Contribution to journalReview article

hydrazine
Hydrazine
Fuel cells
Carbon
Electrocatalysts
1 Citation (Scopus)

Heterogeneity in gut microbiota drive polyphenol metabolism that influences α-synuclein misfolding and toxicity

Ho, L., Zhao, D., Ono, K., Ruan, K., Mogno, I., Tsuji, M., Carry, E., Brathwaite, J., Sims, S., Frolinger, T., Westfall, S., Mazzola, P., Wu, Q., Hao, K., Lloyd, T. E., Simon, J., Faith, J. & Pasinetti, G. M., Feb 1 2019, In : Journal of Nutritional Biochemistry. 64, p. 170-181 12 p.

Research output: Contribution to journalArticle

Synucleins
Polyphenols
Metabolism
Toxicity
Germ-Free Life

Hidden populations: discovering the differences between the known and the unknown drug using populations in the Republic of Georgia

Gogia, M., Lawlor, C., Shengelia, N., Stvilia, K. & Raymond, H., Feb 12 2019, In : Harm reduction journal. 16, 1, 1 p.

Research output: Contribution to journalArticle

Open Access
Georgia (Republic)
Harm Reduction
HIV
Pharmaceutical Preparations
Population

High and Stable Human Immunodeficiency Virus Prevalence among Transwomen with Low Income Recruited with Respondent-driven Sampling, San Francisco, 2010-2016

Raymond, H., Wilson, E. C., Packer, T., Ick, T., Lin, J. & McFarland, W., Feb 1 2019, In : Sexually Transmitted Diseases. 46, 2, p. 118-124 7 p.

Research output: Contribution to journalArticle

San Francisco
HIV
Virus Diseases
Confidence Intervals
Surveys and Questionnaires

High confidence optical confirmations among the high signal-to-noise planck cluster candidates

Boada, S., Hughes, J., Menanteau, F., Doze, P., Felipe Barrientos, L. & Infante, L., Feb 1 2019, In : Astrophysical Journal. 871, 2, 188.

Research output: Contribution to journalArticle

confidence
galaxies
observatory
catalogs
sky

High fat diet aggravates cardiomyopathy in murine chronic Chagas disease

Lizardo, K., Ayyappan, J. P., Cui, M. H., Balasubramanya, R., Jelicks, L. A. & Nagajyothi, J., Jan 1 2019, In : Microbes and Infection. 21, 1, p. 63-71 9 p.

Research output: Contribution to journalArticle

Chagas Disease
High Fat Diet
Cardiomyopathies
Chronic Disease
Infection
1 Citation (Scopus)
Daucus carota
Hardness
carrots
hardness
Calcium
Daucus carota
Carotenoids
carotenes
carrots
Calcium

High-Pressure Synthesis of Lu 2 NiIrO 6 with Ferrimagnetism and Large Coercivity

Feng, H. L., Deng, Z., Wu, M., Croft, M., Lapidus, S. H., Liu, S., Tyson, T. A., Ravel, B. D., Quackenbush, N. F., Frank, C. E., Jin, C., Li, M. R., Walker, D. & Greenblatt, M., Jan 7 2019, In : Inorganic Chemistry. 58, 1, p. 397-404 8 p.

Research output: Contribution to journalArticle

Ferrimagnetism
ferrimagnetism
Coercive force
coercivity
synthesis

High temperature singlet-based magnetism from Hund’s rule correlations

Miao, L., Basak, R., Ran, S., Xu, Y., Kotta, E., He, H., Denlinger, J. D., Chuang, Y. D., Zhao, Y., Xu, Z., Lynn, J. W., Jeffries, J. R., Saha, S. R., Giannakis, I., Aynajian, P., Kang, C. J., Wang, Y., Kotliar, B., Butch, N. P. & Wray, L. A., Dec 1 2019, In : Nature communications. 10, 1, 644.

Research output: Contribution to journalArticle

Open Access
Uranium Compounds
Uranium
Magnets
Phase Transition
Neutrons
1 Citation (Scopus)

Hippo Deficiency Leads to Cardiac Dysfunction Accompanied by Cardiomyocyte Dedifferentiation During Pressure Overload

Ikeda, S., Mizushima, W., Sciarretta, S., Abdellatif, M., Zhai, P., Mukai, R., Fefelova, N., Oka, S., Nakamura, M., Del Re, D., Farrance, I., Park, J. Y., Tian, B., Xie, L-H., Kumar, M., Hsu, C. P., Sadayappan, S., Shimokawa, H., Lim, D. S. & Sadoshima, J., Jan 18 2019, In : Circulation Research. 124, 2, p. 292-305 14 p.

Research output: Contribution to journalArticle

Cardiac Myocytes
Pressure
Oncostatin M
Proteins
Oncostatin M Receptors

History of Hemostasis in Neurosurgery

Paulo, D., Semonche, A., Choudhry, O., Al-Mufti, F., Prestigiacomo, C. J., Roychowdhury, S., Nanda, A. & Gupta, G., Apr 1 2019, In : World Neurosurgery. 124, p. 237-250 14 p.

Research output: Contribution to journalReview article

Neurosurgery
Hemostatics
Hemostasis
Postoperative Hemorrhage
Skull
1 Citation (Scopus)

HiText: Text reading with dynamic salience marking

Yang, Q., Wang, S., Cheng, Y. & De Melo, G., Jan 1 2019, 26th International World Wide Web Conference 2017, WWW 2017 Companion. International World Wide Web Conferences Steering Committee, p. 311-319 9 p.

Research output: Chapter in Book/Report/Conference proceedingConference contribution

Students
Experiments
Deep learning
4 Citations (Scopus)

HIV-1 reservoirs in urethral macrophages of patients under suppressive antiretroviral therapy

Ganor, Y., Real, F., Sennepin, A., Dutertre, C. A., Prevedel, L., Xu, L., Tudor, D., Charmeteau, B., Couedel-Courteille, A., Marion, S., Zenak, A. R., Jourdain, J. P., Zhou, Z., Schmitt, A., Capron, C., Eugenin, E., Cheynier, R., Revol, M., Cristofari, S., Hosmalin, A. & 1 othersBomsel, M., Apr 1 2019, In : Nature Microbiology. 4, 4, p. 633-644 12 p.

Research output: Contribution to journalArticle

HIV-1
Macrophages
Therapeutics
Interleukin-4 Receptors
T-Lymphocytes

HIV infection and latency induce a unique metabolic signature in human macrophages

Castellano, P., Prevedel, L., Valdebenito, S. & Eugenin, E., Dec 1 2019, In : Scientific reports. 9, 1, 3941.

Research output: Contribution to journalArticle

Open Access
HIV Infections
Macrophages
HIV
Tricarboxylic Acids
Mitochondrial Dynamics

Hmga2 regulation of tooth formation and association with Sox2 and Nanog expression

Kodama, Y., Harinath, D., Mihara-Tomiyama, N., Tominaga, N., Ide, Y., Nakahara, T., Maeda, M., Igarashi, M., D'Armiento, J., Chada, K. & Imai, K., Feb 19 2019, In : Biochemical and Biophysical Research Communications. 509, 4, p. 1008-1014 7 p.

Research output: Contribution to journalArticle

Bone Development
Tooth
Bone
Enamel Organ
Tooth Germ

HMGB1 gene silencing inhibits neuroinflammation via down-regulation of NF-κB signaling in primary hippocampal neurons induced by Aβ 25–35

Nan, K., Han, Y., Fang, Q., Huang, C., Yu, L., Ge, W., Xiang, F., Tao, Y., Cao, H. & Li, J., Feb 1 2019, In : International Immunopharmacology. 67, p. 294-301 8 p.

Research output: Contribution to journalArticle

HMGB1 Protein
NF-kappa B
Gene Silencing
Down-Regulation
Neurons

Holantarctic diversity varies widely among genetic loci within the gametophytically allotriploid peat moss Sphagnum × falcatulum

Karlin, E. F. & Smouse, P., Jan 1 2019, In : American Journal of Botany. 106, 1, p. 137-144 8 p.

Research output: Contribution to journalArticle

Sphagnopsida
Genetic Loci
allopolyploidy
Sphagnum
Population Genetics

Hölder's identity

Brinda, W. D., Klusowski, J. & Yang, D., May 1 2019, In : Statistics and Probability Letters. 148, p. 150-154 5 p.

Research output: Contribution to journalArticle

2 Citations (Scopus)

Homocysteine Modification in Protein Structure/Function and Human Disease

Jakubowski, H., Jan 1 2019, In : Physiological Reviews. 99, 1, p. 555-604 50 p.

Research output: Contribution to journalArticle

Homocysteine
Hyperhomocysteinemia
Proteins
Cardiovascular Abnormalities
Premature Mortality