Base incorporation and extension at a site-specific ethenocytosine by Escherichia coli DNA polymerase I Klenow fragment

Devendranath Simha, Deepmala Yadav, Robert W. Rzepka, Vaseem A. Palejwala, M. Zafri Humayun

Research output: Contribution to journalArticlepeer-review

6 Scopus citations

Abstract

Ethenocytosine (ε{lunate}C) is a highly mutagenic exocyclic DNA lesion induced by carcinogens vinyl chloride and urethane. We have examined base incorporation and extension at a site-specific ε{lunate}C residue by a quantitative gel electrophoretic assay using an exonuclease-deficient version of Escherichia coli DNA polymerase I (Klenow fragment) as the model enzyme. The data show that the Km for incorporation of adenine or thymine opposite ε{lunate}C by is about 5 orders of magnitude higher than that for the incorporation of guanine opposite normal cytosine. The KM for base extension past ε{lunate}C:A and ε{lunate}C:T pairs is 1-2 orders of magnitude higher than that observed for a C:G pair. Although adenine misinsertion is favored over that of thymine, base extension occurs more rapidly when the base incorporated opposite ε{lunate}C is thymine.

Original languageEnglish (US)
Pages (from-to)265-269
Number of pages5
JournalMutation Research - Fundamental and Molecular Mechanisms of Mutagenesis
Volume304
Issue number2
DOIs
StatePublished - Jan 16 1994

All Science Journal Classification (ASJC) codes

  • Molecular Biology
  • Genetics
  • Health, Toxicology and Mutagenesis

Keywords

  • Chemical carcinogens
  • DNA lesions, exocyclic
  • Ethenocysteine
  • Ethyl carbamate
  • Exocyclic DNA lesions
  • Vinyl chloride
  • site-specific DNA polymerase I Klenow fragment

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