New system for archiving integrative structures

Brinda Vallat, Benjamin Webb, Maryam Fayazi, Serban Voinea, Hongsuda Tangmunarunkit, Sai J. Ganesan, Catherine L. Lawson, John Westbrook, Carl Kesselman, Andrej Sali, Helen M. Berman

Research output: Contribution to journalArticlepeer-review

1 Scopus citations

Abstract

Structures of many complex biological assemblies are increasingly determined using integrative approaches, in which data from multiple experimental methods are combined. A standalone system, called PDB-Dev, has been developed for archiving integrative structures and making them publicly available. Here, the data standards and software tools that support PDB-Dev are described along with the new and updated components of the PDB-Dev data-collection, processing and archiving infrastructure. Following the FAIR (Findable, Accessible, Interoperable and Reusable) principles, PDB-Dev ensures that the results of integrative structure determinations are freely accessible to everyone.

Original languageEnglish (US)
Pages (from-to)1486-1496
Number of pages11
JournalActa Crystallographica Section D: Structural Biology
Volume77
DOIs
StatePublished - Dec 1 2021

All Science Journal Classification (ASJC) codes

  • Structural Biology

Keywords

  • Data standards
  • IHM-dictionary
  • Integrative modeling
  • PDB-Dev
  • PDBx/mmCIF

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