Phylogenetic analysis of mammalian SIP30 sequences indicating accelerated adaptation of functional domain in primates

Ning Guo, Jeremy Raincrow, Chi hua Chiu, Lei Yu

Research output: Contribution to journalArticlepeer-review

Abstract

SIP30, characterized by a coiled-coil functional domain, plays a key role in regulating synaptic vesicle exocytosis and is implicated in neuropathic pain resulting from peripheral nerve injury. Because neuropathic pain is studied in primates (including human), domesticated animals, and rodents, we conducted a phylogenetic analysis of SIP30 in selected species of these three groups of mammals. SIP30 exhibits a high degree of sequence divergence in comparison to its protein binding partners SNAP25 and ZW10, which show broad sequence conservation. Notably, we observed an increased rate of change in the highly conserved coiled-coil domain in the SIP30 protein, specifically within primates. This observation suggests an accelerated adaptation of this functional domain in primate species.

Original languageEnglish (US)
Article number101631
JournalBiochemistry and Biophysics Reports
Volume37
DOIs
StatePublished - Mar 2024
Externally publishedYes

All Science Journal Classification (ASJC) codes

  • Biophysics
  • Biochemistry
  • Cell Biology

Keywords

  • Coiled-coil domain
  • Mammal gene
  • Neuropathic pain
  • SIP30

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